Gene Information

Name : SEEH1578_16220 (SEEH1578_16220)
Accession : YP_008247303.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone SseA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3278426 - 3278752 bp
Length : 327 bp
Strand : +
Note : COG1933 Archaeal DNA polymerase II, large subunit

DNA sequence : 
ATGATGATAAAGAAAAAGGCTGCGTTTAGTGAATATCGTGATTTAGAGCAAAGTTACATGCAGCTAAATCACTGTCTTAA
AAAATTTCACCAAATCCGGGCTAAGGTGAGTCAACAGCTTGCTGAAAGGGCAGAGAGCCCCAAAAAGAGCAGAGAGACAG
AGAGTATTCTTCATAACCTATTTCCACAAGGCGTTGCCGGGGTTAACCAGGAGGCCGAGAAGGATTTAAAGAAAATAGTA
AGTTTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAAAAACAAA
AAGGTAA

Protein sequence : 
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKKSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseA NP_456131.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-46 100
sseA NP_805068.1 pathogenicity island protein Virulence SPI-2 Protein 3e-46 100
sseA YP_216405.1 secretion system effector protein SseA Virulence SPI-2 Protein 3e-46 100
sseA AAC28878.1 SseA Virulence SPI-2 Protein 4e-46 99
sseA CAA12184.1 SseA Virulence SPI-2 Protein 4e-46 99
sseA NP_460362.1 secretion system chaperone protein Virulence SPI-2 Protein 6e-46 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_16220 YP_008247303.1 type III secretion system chaperone SseA VFG0498 Protein 2e-46 99