Gene Information

Name : SEEH1578_15545 (SEEH1578_15545)
Accession : YP_008247168.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Resistance
Product : aminoglycoside resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3140946 - 3141734 bp
Length : 789 bp
Strand : +
Note : COG1708 Predicted nucleotidyltransferases

DNA sequence : 
ATGACGCTGTCCATACCGCCCTCGATTCAATGCCAAACGGAAGCGGCATGTCGCCTGATTACTCGTGTCACAGGCGATAC
GTTGCGTGCTATTCATTTATATGGTTCCGCTGTCGCGGGCGGTCTGAAGCCAAACAGCGACATTGATCTACTGGTGACAA
TATGCCAGCCGCTGACGGAGGCCCAACGCGCAACGCTGATGCAGGAATTGCTGGCGCTTTCATCGCCGCCGGGGGCGTCG
GCAGAAAAACGCGCTCTGGAGGTCACTGTCGTGCTTTATTCGCAGCTGGTTCCCTGGTGTTTTCCACCTGCCCGGGAAAT
GCAATTTGGCGAGTGGCTAAGAGAGGACATTTGTCAGGGGATTTATGAACCAGCGCAGCAGGACTGGGACATTGTGTTAC
TGATAACCCAAATTCTGGAAACCAGTATACCGCTAAAGGGAGAACGCGCGGAACGGCTGTTCACGCCAGCCCCTGCGGTG
CAGTTGCTGAAGGCCTTGCGTTATCCCCTCGACCTTTGGCAATCCACGGCAGATGTGCAGGGAGATGAGTATCATATCGT
TTTAACCCTGGCGCGTATCTGGTATACCCTTTCTACCGGGAGATTTACCTCTAAGGATGCGGCGGCTGACTGGCTGTTAC
CTCAGTTGCCAGAAGATTATGCTGCCACGTTGCGTGAGGCGCAGCGTGAATATTTAGGTCTGGAGCAACAGGACTGGCAT
ATTTTGCTGCCTGCGGTCGTACGCTTTGTGGATTTTGCCAAAGCGCACATCCCCACGCAGTTCACATAA

Protein sequence : 
MTLSIPPSIQCQTEAACRLITRVTGDTLRAIHLYGSAVAGGLKPNSDIDLLVTICQPLTEAQRATLMQELLALSSPPGAS
AEKRALEVTVVLYSQLVPWCFPPAREMQFGEWLREDICQGIYEPAQQDWDIVLLITQILETSIPLKGERAERLFTPAPAV
QLLKALRYPLDLWQSTADVQGDEYHIVLTLARIWYTLSTGRFTSKDAAADWLLPQLPEDYAATLREAQREYLGLEQQDWH
ILLPAVVRFVDFAKAHIPTQFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aadA1 CAD92142.1 aminoglycoside adenyltransferase Not tested Not named Protein 2e-50 45
aadA25 YP_005176241.1 aminoglycoside 3''-O-adenyltransferase protein Not tested ICEPmu1 Protein 2e-48 45
aadA1 YP_005797133.1 aminoglycoside 3'-adenyltransferase Not tested AbaR4e Protein 4e-50 45
aadDA1 CAJ77087.1 Aminoglycoside 3-adenylyltransferase Not tested AbaR1 Protein 3e-50 45
aadA1 YP_005797149.1 aminoglycoside 3'-adenyltransferase Not tested AbaR4e Protein 4e-50 45
aadA1 ACV89835.1 AadA1 aminoglycoside (3')(9) adenylyltransferase Not tested AbaR7 Protein 3e-50 45
aadA1 YP_006098376.1 aminoglycoside adenylyltransferase Not tested Tn2411 Protein 4e-50 45
unnamed AFV53113.1 AadA1 aminoglycoside (3') adenyltransferase Not tested AbGRI2-1 Protein 3e-50 45
aadA1 ACN81025.1 AadA1 aminoglycoside (3')(9) adenylyltransferase Not tested AbaR5 Protein 4e-50 45
aadA1 AGK36646.1 AadA1 aminoglycoside (3')(9) adenylyltransferase Not tested AbaR26 Protein 3e-50 45
aadA1 ACY75515.1 aminoglycoside adenyltransferase Not tested Tn6060 Protein 2e-50 45
aadA7 AAR21854.1 aminoglycoside (3'')(9) adenylyltransferase; AAD(3'')(9) Not tested SGI1 Protein 3e-52 45
aadA7 AAT37846.1 aminoglycoside adenyltransferase Not tested Class I integron Protein 3e-52 45
aadA7 AGF35062.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 3e-52 45
aadA7 AGK06932.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 3e-52 45
aadA7 AGK06969.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 3e-52 45
aadA7 AGK07015.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 3e-52 45
aadA7 AGK07073.1 aminoglycoside adenyltransferase Not tested SGI1 Protein 3e-52 45
aadA2 AAK02046.1 streptomycin/spectinomycin resistance protein Not tested SGI1 Protein 7e-49 45
aadA2 AGF35027.1 AadA2 aminoglycoside adenylyltransferase Not tested SGI1 Protein 7e-49 45
aadA2 ACF06158.1 aminoglycoside 3''-adenyltransferase Not tested Tn5036-like Protein 3e-48 45
aadA1 CAJ77048.1 Aminoglycoside adenylyltransferase Not tested AbaR1 Protein 4e-50 45
aadA1 AAL08435.1 streptomycin adenyltransferase AadA1 Not tested SRL Protein 3e-45 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein NC_003198.gene.p01 Protein 3e-116 97
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AJ704863.gene12.p01 Protein 3e-49 49
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AJ628353.gene.p01 Protein 3e-40 48
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AF174129.3.gene3.p01 Protein 8e-48 47
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AF294653.1.gene3.p01 Protein 2e-48 47
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein U37105.2.gene4.p01 Protein 3e-48 47
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AM932669.1.gene3.p01 Protein 4e-50 46
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein DQ865198.gene.p01 Protein 1e-44 46
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AY139598.1.gene2.p01 Protein 3e-44 46
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein NC_010558.1.6275994. Protein 1e-44 46
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AJ584652.2.gene7.p01 Protein 3e-49 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AF047479.2.orf1.gene Protein 4e-49 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein JN596991.2.gene3.p01 Protein 1e-50 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein FR748153.1.gene5.p01 Protein 1e-50 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AY123251.gene3.p01 Protein 2e-50 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein NC_010410.6003168.p0 Protein 2e-50 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein Y18050.2.gene6.p01 Protein 1e-50 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AF313471.1.gene3.p01 Protein 2e-50 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AY339625.2.gene17.p0 Protein 2e-50 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein EU118119.1.orf1.gene Protein 4e-49 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein AY263741.gene.p01 Protein 2e-47 45
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein NC_010410.6003170.p0 Protein 3e-50 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_15545 YP_008247168.1 aminoglycoside resistance protein VFG1026 Protein 2e-45 42