Gene Information

Name : SEEH1578_14510 (SEEH1578_14510)
Accession : YP_008246961.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : type III secretion protein SopE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2934657 - 2935379 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence : 
GTGACAAAAATAACTTTATTTCCCCAGGATTTTAGAATCCAAAAACAGGAAACCACACTACTAAAAGAAAAATCAACCGA
GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATTGAATTAAGGTCAAAATTATCTGAACGTTTTA
TTTCGCATAAGAACACTGAGTCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT
AAAGTCGTTAAAGATTTTATGCTTCAAACGCTCAATGATATAGATATTAGAGGTAGTGCGAGTAAAGACCCCGCATACGC
CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGAATAAAGATCAGTGTTGTAATTTGCTCATCAGCAAAG
GGATCAACATAGCGCCTTTTCTTCAGGAAATTGGCGAAGCAGCGGAAAATGCAGGTCTGCCCGGAACAACCAAAAATGAC
GTTTTTACGCCAAGCGGCGCAGGGGCCAATCCTTTTATAACTCCGTTGATTTCATCAGCAAACAGTAAGTATCCACGTAT
GTTTATCAATCAACATCAGCAGGCATCCTTTAAAATCTATGCGGAGAAGATCATTATGACAGAAGTTGCACCACTGTTTA
ATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACTGATACTAGAAAACATTGCTAATAAATATATACAATACACTCCC
TGA

Protein sequence : 
MTKITLFPQDFRIQKQETTLLKEKSTEKNSLAKSILAVKNHFIELRSKLSERFISHKNTESSATHFHRGSASEGRAVLTN
KVVKDFMLQTLNDIDIRGSASKDPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAENAGLPGTTKND
VFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQYTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 2e-108 99
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 2e-108 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_14510 YP_008246961.1 type III secretion protein SopE VFG0467 Protein 1e-81 70