Gene Information

Name : SEEH1578_12390 (SEEH1578_12390)
Accession : YP_008246543.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2492707 - 2493714 bp
Length : 1008 bp
Strand : -
Note : COG0609 ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGTCATGCTCGTTTTCCGTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGGTTTTAAG
CCTGGTCATTGGCGCGAAACCGCTGCCCGCCGCCGTCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCA
CCATCGTCCTGGATGCGCGTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGTGCGTTGGGTCTCGCCGGGGCGCTC
ATGCAAACACTTACTCGCAACCCGCTCGCCGACCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACT
GGGTGCGGCGCTGTTTGGTTTCTCCACGCCGCTGGAACAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCGCTGA
TTGTCGCCTTCACCGGTAGTCAGGGCGGCGGCCAGTTAAGCCCGGTCCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCG
GTACTGGAAGGATTGACCAGCGGCATCGCGCTGTTAAATCCAGAGGTCTATGATCAGCTTCGCTTCTGGCAGGCGGGATC
GCTGGACATTCGCAGCCTGCAAACGTTGAAAGTCGCGCTTGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGA
GCCGTGCGCTGAACAGCCTGAGCCTCGGCAGCGATACCGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATC
GGATTACTGGCGATTACCGTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGCGCAGACCACCGTTGGTCGCTGCCGGTAACACTACTGGCAACCCCTACTCTGCTGC
TTTTTGCCGATATTATTGGTCGTCTGTTAGTGCCGGGCGAACTCCGCGTATCGGTCGTCAGTGCGTTTATCGGCGCGCCG
GTACTTATTTTTCTGGTACGCCGTAAATCGAACGGAGGCGGCCTGTGA

Protein sequence :
MSCSFSVTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGA
VLEGLTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPTLLLFADIIGRLLVPGELRVSVVSAFIGAP
VLIFLVRRKSNGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 1e-32 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 1e-32 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 1e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_12390 YP_008246543.1 iron-enterobactin transporter membrane protein VFG0926 Protein 7e-102 88