Name : SEEH1578_12335 (SEEH1578_12335) Accession : YP_008246532.1 Strain : Salmonella enterica 41578 Genome accession: NC_021810 Putative virulence/resistance : Resistance Product : transposon Tn10 TetD protein Function : - COG functional category : - COG ID : - EC number : - Position : 2479158 - 2479499 bp Length : 342 bp Strand : + Note : COG2207 AraC-type DNA-binding domain-containing proteins DNA sequence : ATGACCATTTCCGCTCAGGTTATCGACACGATTGTCGAGTGGATTGATGATAATTTGAATCAGCCGTTACGTATTGATGA TATTGCCCGTCATGCGGGGTATTCCAAGTGGCACCTGCAGCGCCTTTTTATGCAGTACAAAGGGGAGAGTCTGGGACGCT ACGTGCGTGAACGGAAGCTAAAACTGGCGGCGCGCGACCTGCTCGACACCGACCAGAAGGTGTATGATATTTGTCTCAAG TATGGTTTTGATTCGCAGCAAACCTTTACGCGCATTTTTACCCGCACGTTCAACCTGCCGCCAGGCGCTTATCGTAAAGA AAAGCATGGCCGTACGCATTGA Protein sequence : MTISAQVIDTIVEWIDDNLNQPLRIDDIARHAGYSKWHLQRLFMQYKGESLGRYVRERKLKLAARDLLDTDQKVYDICLK YGFDSQQTFTRIFTRTFNLPPGAYRKEKHGRTH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 5e-18 | 48 |
tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 1e-16 | 46 |
tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 1e-16 | 46 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP001138.1.gene612.p | Protein | 4e-43 | 99 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP001918.1.gene327.p | Protein | 1e-18 | 48 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP000647.1.gene4499. | Protein | 3e-18 | 48 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP001138.1.gene4488. | Protein | 2e-18 | 48 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP000647.1.gene1624. | Protein | 1e-17 | 46 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | NC_010558.1.6276025. | Protein | 6e-17 | 46 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | BAC0371 | Protein | 2e-17 | 45 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | NC_002695.1.914293.p | Protein | 2e-17 | 45 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP001918.1.gene2033. | Protein | 5e-18 | 45 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP000034.1.gene4505. | Protein | 4e-17 | 44 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | BAC0560 | Protein | 3e-18 | 43 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | NC_002695.1.917339.p | Protein | 3e-18 | 43 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP000034.1.gene1596. | Protein | 3e-18 | 43 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | CP001138.1.gene1637. | Protein | 4e-18 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | VFG0585 | Protein | 1e-18 | 48 |
SEEH1578_12335 | YP_008246532.1 | transposon Tn10 TetD protein | VFG1038 | Protein | 6e-17 | 46 |