Gene Information

Name : SEEH1578_11975 (SEEH1578_11975)
Accession : YP_008246460.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2406598 - 2407284 bp
Length : 687 bp
Strand : +
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
ATGCCAGCGGAAAACAGTGTTGAAGTTCATCGTCTCAGGAAGTCCGTCGGTCAGGGTGAGCATGAGCTTTCCATCCTTAC
CGGAGTTGAACTGGTTGTCAAACGCGGCGAAACCATTGCGCTGATTGGCGAATCAGGATCGGGAAAATCTACGCTGCTGG
CGATTCTCGCCGGACTGGATGACGGCAGTAGCGGAGAGGTCAGACTGGTCGGGAAACCGCTTCACCAGATGGACGAAGAG
GCGCGGGCGCAGCTTCGCGCTCAGCATGTCGGTTTTGTTTTTCAATCCTTCATGCTTATTCCTACGCTTAACGCGCTGGA
AAACGTTGAGCTACCGGCCCTGCTACGCGGTGAAAACAGCGGTCAGAGTAAGGCGGGGGCGAAAGCGTTGCTCGAACAAC
TGGGACTGGGAAAACGGCTTGACCACCTTCCGGCACAGCTTTCCGGCGGCGAACAGCAGCGCGTAGCGCTGGCGCGCGCG
TTTAACGGGCGTCCTGATGTGCTGTTTGCCGATGAGCCGACGGGCAACCTTGACCGTCAGACCGGAGATAAAATCGCCGA
CCTGCTATTTTCGCTTAACCGCGAACACGGCACCACGCTGATTCTGGTGACGCACGACCCGGCGCTGGCGGCGCGCTGCG
ACCGGCGGCTGCGGTTGGTCAACGGTCAGTTACAGGAGGAGGCATGA

Protein sequence : 
MPAENSVEVHRLRKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVRLVGKPLHQMDEE
ARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLRGENSGQSKAGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPALAARCDRRLRLVNGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_11975 YP_008246460.1 ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 1e-32 49
SEEH1578_11975 YP_008246460.1 ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 1e-37 47
SEEH1578_11975 YP_008246460.1 ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 5e-34 42