Gene Information

Name : SEEH1578_09960 (SEEH1578_09960)
Accession : YP_008246061.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein StiB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2002814 - 2003497 bp
Length : 684 bp
Strand : -
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence :
ATGAATTCATTGGCTAAAGCAGGGTTGCTTTGTTGCCTGTTGTGCGGTTCGCTGGCGCATGCCGCAGGGATAAACATCGG
CACAACGCGGGTTATTTTTCACGGCGATGCCAAAGATACGTCCATATCGATAAGCAATAACGACAACGTTCCCTATTTAA
TTCAGTCCTGGGCGCAATCGATCAGCGAAACCGGGGCGAGCGGCGATGCGCCGTTTATGGTCACCCCGCCGCTTTTTCGC
CTTAATGGCGGGCAAAAGAACGTACTACGAATTATCCGTACCGGCGGCAATTTGCCGGAAGATCGCGAGTCGCTGTACTG
GCTGGATATTAAATCGATTCCCAGCAGCAATCCGGACAATAAACACAACACACTCATGCTGGCCGTTAAAGCGGAATTTA
AGCTGATTTACCGGCCAAAAGCGTTAACCCAAAAACCAGAAGAGGTTGCCGATCGATTAACGTGGTCGCGTCAGGGTCGC
ACGCTCACCGTGAAGAACCCCACGCCCTATTATATGAACTTCGCCACCCTTTCCGTTGGCAGTCAAAAAGTGAAAGCCCC
GCGCTATGTGGCGCCTTTCGGCAACGCGCAGTACACGCTGCCTGCCGCCGCCAGCGGCACGATCGTCTGGTCTATCATCA
ACGATTTTGGCGGTACTGGCCCCGAACATAAACAAACGCCTTGA

Protein sequence :
MNSLAKAGLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDTSISISNNDNVPYLIQSWAQSISETGASGDAPFMVTPPLFR
LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR
TLTVKNPTPYYMNFATLSVGSQKVKAPRYVAPFGNAQYTLPAAASGTIVWSIINDFGGTGPEHKQTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 5e-41 42
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-37 41