Gene Information

Name : SEEH1578_09140 (SEEH1578_09140)
Accession : YP_008245897.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein BcfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1821056 - 1821742 bp
Length : 687 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGAAAAAAAACTTACCGATTTTCCTTCGATTATTGCTACTGCTGTCGGCGGCCGGCCTGTCGTTTGCCGCGCAGGCGGG
AGGCATTGCGCTGGGCGCGACCAGGGTGATTTATCCGCAGGGAAGTAAGCAAACCTCCTTGCCGATTATTAATTCTTCTG
CCAGCAATGTTTTTTTAATTCAGTCATGGGTCGCCAATGCCGATGGTTCACGCTCGACGGATTTTATCATTACGCCGCCT
CTCTTTGTGATCCAGCCTAAAAAAGAAAATATATTACGTATTATGTATGTCGGGCCGTCATTACCGACCGATCGCGAAAG
CGTATTTTATTTAAACAGTAAAGCGATACCCTCTGTCGATAAAAATAAATTGACCGGCAACTCCCTGCAAATTGCGACGC
AAAGCGTGATTAAGCTATTTATCCGCCCGAAAAATCTGGCGGAGGCGCCAGCTCATGCCCCGTCGACGCTTCGCTGCCGT
AACGAGCGCGGCCAGCTAACGATTACTAACCCTTCGCCGTACTACGTTTCGATGGTTGAACTGTACAGCGCGGGGAAAAA
ACTGCCGAATACTATGGTACCGCCGAAAGGCGCGATCACTCTCCCGGCGACGCCCGGCCAGGTATCTTTGCGCACGGTAA
ACGATTTTGGCGCAACGACGCCAGCACGCGTTTGTCCAGCTTCATGA

Protein sequence : 
MKKNLPIFLRLLLLLSAAGLSFAAQAGGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFIITPP
LFVIQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLAEAPAHAPSTLRCR
NERGQLTITNPSPYYVSMVELYSAGKKLPNTMVPPKGAITLPATPGQVSLRTVNDFGATTPARVCPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 9e-45 51
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-42 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_09140 YP_008245897.1 fimbrial chaperone protein BcfB VFG0875 Protein 5e-46 52
SEEH1578_09140 YP_008245897.1 fimbrial chaperone protein BcfB VFG0445 Protein 5e-48 51
SEEH1578_09140 YP_008245897.1 fimbrial chaperone protein BcfB VFG0911 Protein 2e-42 49
SEEH1578_09140 YP_008245897.1 fimbrial chaperone protein BcfB VFG1644 Protein 2e-42 49
SEEH1578_09140 YP_008245897.1 fimbrial chaperone protein BcfB VFG0455 Protein 6e-35 42