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Name : F504_4344 (F504_4344) Accession : YP_008238073.1 Strain : Genome accession: NC_021745 Putative virulence/resistance : Virulence Product : Type III secretion outermembrane pore forming protein (YscC,MxiD,HrcC, InvG) Function : - COG functional category : - COG ID : - EC number : - Position : 1107800 - 1109506 bp Length : 1707 bp Strand : - Note : FIG00016496 DNA sequence : ATGGCCGCCGCGCTGCTGCTATGGACGGCAGGCACGGTCTGCGCCGCGCCCATCCCCTGGCAGTCGCAGAAATTCGAATA CGTGGCCGACCGCAAGGACATCAAGGAAGTCCTGCGCGACCTGGGGGCCAGCCAGCATGTGATGACGTCGATCTCGACGC AGGTCGAGGGCAGCGTGACGGGCTCGTTCAACGAGACGCCGCAGAAGTTTCTCGACCGCATGGCCGGCACGTTCGGCTTT GCGTGGTACTACGACGGCGCGGTGCTGCGCGTGACCAGCGCCAACGAAGCGCAGAGCGCCACCATCGCGCTGACCCGCGC CTCGACCGCGCAGGTCAAGCGGGCGCTGACGCGCATGGGCATCGCCGATTCGCGCTTCCCGATCCAGTATGACGACGACT CCGGCAGCATCGTCGTCTCCGGCCCGCCGCGCCTGGTCGAGCTGGTGCGGGACATCGCCCAGGTGATCGATCGCGGCCGC GAGGACGCCAACCGCACCGTGGTGCGCGCCTTCCCGCTGCGCTACGCATGGGCGACCGACCACCGGGTCACGGTCAACGG GCAGTCGGTCAACATCCGGGGCGTGGCGTCCATCCTGAACAGCATGTACGGCGGCGATGGCCCGTCGGACAGCGGCACCG CGCCGCGTGCGCAGGATCGCCGCCTGGACAGCGTCGCCCCGGGCGAAGCCAACGCCGGCCGCGCCGGCACGCGGGCACTG TCGAGCCTGGGCGGCGGCAAGTCGCCGCTGCCGCCCGGCGGCACCGGTCAATACGTCGGCAACAGCGGCCCGTACGCGCC GCCGCCTTCCGGCGAGAACCGCCTGCGCAGCGACGAGCTCGATGACCGCGGCAGCACGCCCATCATCCGCGCCGATCCGC GCAGCAACTCGGTGCTGGTGCGCGACCGGGCCGACCGCATGGCGGCGCACCAGTCGCTGATCGAATCGCTGGACAGCCGT CCGGCCGTGCTGGAGATCAGCGCCAGCATCATCGACATCAGCGAGAACGCGCTCGAGCAGCTGGGCGTGGACTGGCGCCT GCACAACAGCCGCTTCGACCTGCAGACCGGCAACGGCACCAACACCATGCTCAACAACCCGGGCTCGCTCGATTCGGTGG CCACCACCGCCGGCGCCGCGGCCGCCATCGCCGCCACGCCGGCGGGCGGGGTGCTGAGCGCGGTGATCGGCGGCGGCTCG CGCTATCTGATGGCGCGCATCAGCGCCCTGCAGCAGACCGACCAGGCGCGCATCACCGCCAACCCCAAGGTGGCCACGCT GGACAACACCGAGGCCGTGATGGACAACCGGCAGAACTTCTACGTGCCGGTCGCCGGCTACCAGTCGGCCGATCTGTACG CCATTTCGGCCGGCGTGTCGCTGCGCGTGCTGCCGATGGTGGTGATGGACGGCGGCACCGTGCGCATCCGCATGAACGTC CACATCGAAGACGGCCAGATCACCAGCCAGCAGGTCGGCAACCTGCCCATCACCAGCCAGAGCGAGATCGACACGCAGGC GCTGATCAACGAAGGCGACAGCCTGCTGATCGCCGGCTACTCGGTGGAGCAGCAGAGCAAGTCGGTGGACGCGGTGCCGG GCCTGTCGAAGATCCCGCTGGTGGGCGCGCTGTTCCGGACCGACCAGACCACGGGGAAGCGGTTCCAGCGGATGTTCCTG GTGACGCCGCGGGTGATTACGCCGTAG Protein sequence : MAAALLLWTAGTVCAAPIPWQSQKFEYVADRKDIKEVLRDLGASQHVMTSISTQVEGSVTGSFNETPQKFLDRMAGTFGF AWYYDGAVLRVTSANEAQSATIALTRASTAQVKRALTRMGIADSRFPIQYDDDSGSIVVSGPPRLVELVRDIAQVIDRGR EDANRTVVRAFPLRYAWATDHRVTVNGQSVNIRGVASILNSMYGGDGPSDSGTAPRAQDRRLDSVAPGEANAGRAGTRAL SSLGGGKSPLPPGGTGQYVGNSGPYAPPPSGENRLRSDELDDRGSTPIIRADPRSNSVLVRDRADRMAAHQSLIESLDSR PAVLEISASIIDISENALEQLGVDWRLHNSRFDLQTGNGTNTMLNNPGSLDSVATTAGAAAAIAATPAGGVLSAVIGGGS RYLMARISALQQTDQARITANPKVATLDNTEAVMDNRQNFYVPVAGYQSADLYAISAGVSLRVLPMVVMDGGTVRIRMNV HIEDGQITSQQVGNLPITSQSEIDTQALINEGDSLLIAGYSVEQQSKSVDAVPGLSKIPLVGALFRTDQTTGKRFQRMFL VTPRVITP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3003 | YP_244071.1 | HrcC protein | Virulence | Hrp PAI | Protein | 4e-116 | 46 |
| hrcC | NP_636613.1 | HrcC protein | Virulence | Hrp PAI | Protein | 4e-116 | 46 |
