Gene Information

Name : F504_4157 (F504_4157)
Accession : YP_008237886.1
Strain :
Genome accession: NC_021745
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 877724 - 878407 bp
Length : 684 bp
Strand : -
Note : FIG00001668

DNA sequence :

ATGCACATCCTCCTAATAGAAGACGATCAGAAAGCGGCCCGCCTGCTGGCCAGGGGCTTGCAGGAGGAAGGCTTCGAGGT
GGCGGTCGCGCACTCCGCGGAAGAGGCCGATGCCTCGCTTCTGGTGGCATGCCAGCTGATCATCCTGGATTGGATGCTCC
CGGGCAAGGACGGCATCGCCCTGTGCCGCGAGCTGCGCGAGCGCGATCTCCAGACCCCCGTCCTCATGCTGACCGCCCGC
GACGCGACCGCCGATCGCATCGCCGGCCTGGATACCGGCGCCGACGACTACCTGACCAAGCCCTTCGTCTTCGATGAGTT
GCTCGCCCGCGTCCGCGCGCTGTTGCGGCGGGCCCGGCTGGCGCCCGCCGCGCCGCGGGTCATCGGCGACCTCGTGCTCG
ATCCGAACGCGCGGGCGGTGACGCGCGGCGGCCAGGCGCTCGATGTCACGCCCAAGGAATACGCGATCCTCGAATACCTG
ATGCGGCATGCCGGGCAGATCGTCAGCCGCCTGCAGCTGGCCGAGCACGTCTGGCGCGCCGACCTGATCGCGATCGACAA
CCTCATCGACGTGCACATGAAGAACCTGCGCCGCAAGGTCGATCCGCCCGGCCAGCCGGCCCTCATCCATACGGTGCGGG
GCCAGGGCTTTCGCCTCGCGGCGCCGGAGCGCCGGCATGCTTAG

Protein sequence :

MHILLIEDDQKAARLLARGLQEEGFEVAVAHSAEEADASLLVACQLIILDWMLPGKDGIALCRELRERDLQTPVLMLTAR
DATADRIAGLDTGADDYLTKPFVFDELLARVRALLRRARLAPAAPRVIGDLVLDPNARAVTRGGQALDVTPKEYAILEYL
MRHAGQIVSRLQLAEHVWRADLIAIDNLIDVHMKNLRRKVDPPGQPALIHTVRGQGFRLAAPERRHA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	8e-29	44
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	3e-28	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	BAC0197	Protein	2e-31	45
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	BAC0083	Protein	1e-32	44
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	CP000675.2.gene1535.	Protein	3e-25	44
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	BAC0308	Protein	4e-33	44
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	BAC0125	Protein	2e-33	43
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	BAC0111	Protein	2e-34	42
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	AE000516.2.gene3505.	Protein	2e-28	42
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	BAC0487	Protein	4e-20	41
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	BAC0638	Protein	5e-24	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	VFG0596	Protein	3e-29	44
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	VFG0473	Protein	3e-23	43
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	VFG1390	Protein	1e-31	41
F504_4157	YP_008237886.1	DNA-binding heavy metal response regulator	VFG1389	Protein	7e-25	41