Gene Information

Name : F504_4121 (F504_4121)
Accession : YP_008237851.1
Strain :
Genome accession: NC_021745
Putative virulence/resistance : Unknown
Product : Channel-forming transporter/cytolysins activator of TpsB family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 825706 - 827367 bp
Length : 1662 bp
Strand : +
Note : FIG00001420

DNA sequence :
ATGTCCATGGCCTTGGCGCAGATCGCGCCGGCCGAAGATGCCACGCAGGAACTGTTGCGGCAGCAGGAACGTGAACGCGC
GCTGCGCCAGCGGCAGGAGTCCAAGCCGGACGTGCGGCTGGAGCGCGGGGTGGCCGCCGAGACCGGCCGCCTCCCGGCGG
ACGAGTCGCCGTGCTTCCGCATCGACCGCATCACGCTGACGGGGGACGCCGCCGAGCGCTTCCAGTGGGCGCTGCCTGCG
GCCGATCCGTCGGACGATCCGGCCACCGGCCGGTGCCTGGGCACCGCCGGCATCAACCTGGTGATGAAGCGCGTGCAGAA
CGCCATCGTCGCGCGCGGTTACGTGACCACGCGCGTCCTGGCCGCGCCACAGGACCTGAAGCAGGGCACGCTTGCCCTGA
CGCTGGTGCCGGGGCGCATCCGCGCCATCCGCTTCTCGGACGACAGCAGTCCGCGCGCCACCCGGTGGAATGCGCTGCCG
GCCGCGCCCGGCGACATCCTCAACCTGCGCGATATTGAGCAGGGGCTGGAGAACTTCAAGCGCGTGCCCACGGCCGATGC
CGACATCCAGATCGCGCCCGCCGACGGGCCTGGCGCCACGCCCGGCGAGAGCGATCTGGTGATCGCCTGGAAGCAGGGCC
TGCCGTTCCGCCTGAACGTGGCCGCCGACGATTCCGGCAGCAAGTACACCGGCAAATACCAGGGCAGCGTCACGGTGTCG
TACGACCACTGGTGGACGCTCAACGACCTGTTCTACGCCAGCTTCAACCACGACCTGGGCGGCGGCTACAGCGGCAGCAA
GGGCACGCGCGGCTACACCGTCCACTACGAGGTGCCGTACGACTACTGGCTGCTCGGTTTCACCACCAGCAGCTACGACT
ACTACCAGTCGGTCGTCGGGGCCAACCAGACCTACATCTACAGCGGCACCAGCGAGAACAGCGACGTGCGCCTGTCGCGC
CTGTTCTACCGCGACGCCGTGCGCAAGACCAGCGCCTATGTGCGCGGCTGGGTGCGCAGCTCCGCCAACTTCATCGACGA
CACCGAGATCGAGGTGCAGCGCCGCCGCATGGCCGGCTGGGAAATCGGCCTGAACCACCGCGAGTTCATCGGTGCCGCCA
CGCTCGACGCGAACGTGGCGTACCGCAAGGGCACGGGGATGCTGTCGTCGCTGCCGGCGCCGGAGGAGTCGTTCGACGAG
GGCACCGCCCGCCCGTCGCTGATCACGGCGGATGCGCAACTGACGGTGCCGTTCACCGTCGCGTCGCAGCGGCTGCGCTA
CACGACCGCGTGGCGCGGCCAGTGGAACCGCACGCCGCTGGTGCCGCAAGACCGCTTCTCTATCGGCGGGCGCTACACCG
TGCGCGGCTTCGACGGCGAGAACACGCTGATCGGCGATCGCGGCTGGCTGGTGCGCAACGACCTCGGCTGGACGCTCGGC
AATAGCGGTCAGGAGCTCTATGTGGGCGTGGACTACGGCGAGGTCGGCGGGCAATCCGCGCGCGTGCTGATCGGGCAGCA
CCTGGCCGGTGCCGTGCTGGGCCTGCGCGGCGGCTACAAAGGGCTGTTCTGGGACGTCTTCATCGGCACGCCGCTCAGCA
AGCCCGAGGGCTTCCGGACCGCGCATACCACGGCGGGTTTCAACGTCAGCTGGTCGTACTAG

Protein sequence :
MSMALAQIAPAEDATQELLRQQERERALRQRQESKPDVRLERGVAAETGRLPADESPCFRIDRITLTGDAAERFQWALPA
ADPSDDPATGRCLGTAGINLVMKRVQNAIVARGYVTTRVLAAPQDLKQGTLALTLVPGRIRAIRFSDDSSPRATRWNALP
AAPGDILNLRDIEQGLENFKRVPTADADIQIAPADGPGATPGESDLVIAWKQGLPFRLNVAADDSGSKYTGKYQGSVTVS
YDHWWTLNDLFYASFNHDLGGGYSGSKGTRGYTVHYEVPYDYWLLGFTTSSYDYYQSVVGANQTYIYSGTSENSDVRLSR
LFYRDAVRKTSAYVRGWVRSSANFIDDTEIEVQRRRMAGWEIGLNHREFIGAATLDANVAYRKGTGMLSSLPAPEESFDE
GTARPSLITADAQLTVPFTVASQRLRYTTAWRGQWNRTPLVPQDRFSIGGRYTVRGFDGENTLIGDRGWLVRNDLGWTLG
NSGQELYVGVDYGEVGGQSARVLIGQHLAGAVLGLRGGYKGLFWDVFIGTPLSKPEGFRTAHTTAGFNVSWSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S1 AAQ19124.1 putative hemolysin activator HlyB Not tested PAI I CL3 Protein 2e-97 46
NMB1762 NP_274762.1 hemolysin activation protein HecB Not tested IHT-C Protein 2e-100 45