Gene Information

Name : fliP (F504_3957)
Accession : YP_008237688.1
Strain :
Genome accession: NC_021745
Putative virulence/resistance : Virulence
Product : Flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 646378 - 647127 bp
Length : 750 bp
Strand : +
Note : FIG00138353

DNA sequence : 
ATGAAGCTGTCCGCCCTTCTGCGTCCGCTGGCCGCGCTCGCCCTGCTGTGCGCCGCGCCCGCCGTGTTCGCGCAGGCCCA
GCCCGGCCTGCCGCTGCTAACCGGCACCGCCGGCGGCCAGAGCTATTCGCTGCCGGTCCAGACGCTGGTCTTCCTGACCT
CGCTCGGCTTCCTGCCGGCCATCCTGCTGATGATGAGCAGCTTCACGCGCATCATCATCGTGCTGTCGCTGCTGCGCCAT
GCGCTGGGCACGCAGACCACGCCGCCCAACCAGGTGCTGATCGGCCTGGCGCTGTTCCTGACCTTCTTCGTGATGTCGCC
GGTGCTGGACAAGGTCTACACCGATGCCTACCTGCCGCTGCGCGACAGCAAGATCTCCGTGGAGCAGGCGCTCGACACCG
CCGCCACGCCGCTGCGCCAGTTCATGCTCAAGCAGACCCGCGAGCCCGATCTCGCCCTGTTCGCCAAGATGGGCAACCTG
CCGCCCATCGCCAGCCCGGACCAGGTGCCGATGCGCGCGCTGATCCCGGCCTTCGTCACCAGCGAGCTGAAGACCGCGTT
CCAGATCGGCTTCGCCATCTTCATCCCGTTCCTGGTGATCGATATCGTGGTGGCGGCGGTGCTGATGTCGATGGGGATGA
TGATGGTCACGCCGTCCATCTTCTCGCTGCCGTTCAAGATCATGCTGTTCGTGCTGGTGGACGGCTGGCATCTGCTGCTG
GGGTCGCTGGCCCAGAGCTTCACGCAATAG

Protein sequence : 
MKLSALLRPLAALALLCAAPAVFAQAQPGLPLLTGTAGGQSYSLPVQTLVFLTSLGFLPAILLMMSSFTRIIIVLSLLRH
ALGTQTTPPNQVLIGLALFLTFFVMSPVLDKVYTDAYLPLRDSKISVEQALDTAATPLRQFMLKQTREPDLALFAKMGNL
PPIASPDQVPMRALIPAFVTSELKTAFQIGFAIFIPFLVIDIVVAAVLMSMGMMMVTPSIFSLPFKIMLFVLVDGWHLLL
GSLAQSFTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 43
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 5e-32 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-31 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 2e-28 42
hrcR AAT96146.1 HrcR Virulence T-PAI Protein 2e-23 42
hrcR AAT96200.1 HrcR Virulence T-PAI Protein 1e-23 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-31 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 3e-31 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 3e-31 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-30 41
hrcR ABQ88359.1 HrcR Virulence Hrp PAI Protein 3e-23 41
hrpW AAB05075.1 HrpW Virulence Hrp PAI Protein 3e-23 41
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 5e-26 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 5e-26 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 5e-26 41
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_008237688.1 Flagellar biosynthesis protein FliP VFG2338 Protein 3e-76 74
fliP YP_008237688.1 Flagellar biosynthesis protein FliP VFG2494 Protein 6e-72 69
fliP YP_008237688.1 Flagellar biosynthesis protein FliP VFG2016 Protein 2e-59 62
fliP YP_008237688.1 Flagellar biosynthesis protein FliP VFG1259 Protein 6e-62 61
fliP YP_008237688.1 Flagellar biosynthesis protein FliP VFG0188 Protein 8e-31 41
fliP YP_008237688.1 Flagellar biosynthesis protein FliP VFG0394 Protein 4e-30 41