Gene Information

Name : F504_3876 (F504_3876)
Accession : YP_008237607.1
Strain :
Genome accession: NC_021745
Putative virulence/resistance : Virulence
Product : DNA-binding heavy metal response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 554203 - 554877 bp
Length : 675 bp
Strand : +
Note : FIG00001668

DNA sequence : 
ATGCGACTGCTCATCGTCGAAGACGAGCCCAAGGCGGGCGACTATCTCCTGAAGGGCCTGACGGAATCCGGCTTCGTGGC
CGACCTCGCCCGCTCCGGCCCCGATGGCCTCTACCAGGCCATGGAACACGACTACGACCTGATCGTGCTCGACGTCATGC
TGCCCGGCATGGACGGCTGGCAGGTCATCCGCGAACTGCGTCGCCGCAAGACCACGCCGGTGCTCTTCCTCACCGCCCGC
GACGAGCTGTCCGACCGCCTGAAGGGCCTGGAGCTGGGCGCCGACGATTACCTCGTCAAGCCCTTCGCCTTTGCCGAGCT
GGTGGCGCGCGTGCACACCATCCTGCGGCGCGGGCCGATGCGCGAGAGCGAGGTCCTCGAAATCGCCGACCTGACCATCG
ACACCATCAAGCGCCGCGTCACGCGCGCCGGCCGCAGGATCGACCTGACTGCCAAGGAATACGCCCTGCTGCACCTGCTG
GCGCGCCGCACGGGCGAGGTGCTGTCGCGCTCGCTGATCTCCTCGCAGGTGTGGGACGTGAACTTCGACAGCAACACCAA
CGTGGTCGACGTCGCCATCCGCCGCCTGCGCGCCAAGGTGGACGACCCGTTCGAGCACAAGCTGATCCACACGCTGCGCG
GCATGGGCTACGTGCTGGACACGGTGGCCCGATGA

Protein sequence : 
MRLLIVEDEPKAGDYLLKGLTESGFVADLARSGPDGLYQAMEHDYDLIVLDVMLPGMDGWQVIRELRRRKTTPVLFLTAR
DELSDRLKGLELGADDYLVKPFAFAELVARVHTILRRGPMRESEVLEIADLTIDTIKRRVTRAGRRIDLTAKEYALLHLL
ARRTGEVLSRSLISSQVWDVNFDSNTNVVDVAIRRLRAKVDDPFEHKLIHTLRGMGYVLDTVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-59 57
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-58 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator BAC0125 Protein 2e-73 68
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator BAC0197 Protein 1e-70 68
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator BAC0083 Protein 3e-68 65
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator BAC0638 Protein 6e-61 65
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator BAC0308 Protein 2e-65 63
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator BAC0111 Protein 6e-65 61
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator BAC0347 Protein 2e-57 56
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_003923.1003417.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_013450.8614146.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_002951.3238224.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_007793.3914065.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_002758.1121390.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_010079.5776364.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_002952.2859858.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_007622.3794948.p0 Protein 4e-42 44
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator AE015929.1.gene1106. Protein 1e-36 43
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator AE000516.2.gene3505. Protein 5e-31 42
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_002952.2859905.p0 Protein 3e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_009641.5332272.p0 Protein 4e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_013450.8614421.p0 Protein 4e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_007793.3914279.p0 Protein 4e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_003923.1003749.p0 Protein 5e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_007622.3794472.p0 Protein 3e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_002745.1124361.p0 Protein 4e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_009782.5559369.p0 Protein 4e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_002951.3237708.p0 Protein 4e-32 41
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator NC_002758.1121668.p0 Protein 4e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator VFG0596 Protein 9e-60 57
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator VFG1389 Protein 1e-32 45
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator VFG1390 Protein 6e-38 43
F504_3876 YP_008237607.1 DNA-binding heavy metal response regulator VFG1386 Protein 7e-36 43