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Name : F504_5021 (F504_5021) Accession : YP_008238746.1 Strain : Genome accession: NC_021745 Putative virulence/resistance : Virulence Product : Type III secretion translocator of effector proteins (HrpF, NolX) Function : - COG functional category : - COG ID : - EC number : - Position : 1942305 - 1944398 bp Length : 2094 bp Strand : - Note : FIG00079505 DNA sequence : ATGCCGGGTTCGCTGTTCTTCCAGTTCGACCACTCCACGGGCAGCACCCGTCCGGACCTGCCGACCGACCTGTTCTTCAG CTTCGGCGATTCCATCTCGCGTGCGGTGCAGGACGCGTCGAATCAATCGCCGGAGCAGGCTCCGGCCGCCGACCCGGCTC CGGCCAGCCCGGACGGCCAATCCTGCCAGCCGAGCCAGCCCGCCACCCCGCCCGTCGGCAGCGACGTGACCTGGAACGGC GGTACGCTCAACGACACCCAGCTGCAGATCATCGGCATCCTGAACCTGCACAAGGACAAGGGCGATATCAGCTGGGACAA GCTGCAGGACAAGATCAACGACCCCGACACGCCGCCCGACCTGAAGTGGGCACTGCAGGCGCTGTCGCAGGATTTCAACC TGTTCCAGGCGATCGGCTCGCAGGGCGACGGCCGTTTCGGCGGCAAGATCAAGGGCAAGGATCTGGCCGAATTCGCCAAG AGCCATTCGCAGGTCCTGACGTGGAACAGCGGCACGCTCAACGACAGCCAGCTGGAGATCATGTCCATCCTGGCCCGCCA CAAGGACAAGATGCCGGTCGACTGGAGCTCGATCCAGGACAAGATCAATGATCCCAGCACGCCGTCCGACCTGAAGGCCG CGCTGCAGGCGCTGGCCAACGATCCGGCGCTGTTCTTCGCCATCGGCTCGCAGGGCGACGGCAACTGCAAGGGCAAGATC AAGGCCGGCGACGTGAGCAAGTTCGCGGACAACCACCCGCAGGTGGAGGAGTACAACCGCAAGAAGGCCGAAGGCTATGT GAAGAACTACATCCCGTCCGACGCCAAGCCGGGCGACAAGCCTTCGGCCATGACGCAGAACGATGCGCTGCGCGAGCTGT ACCGCTACTCCGACTACCTGCCGAAGAAGCTGGACATGGAAGCCTTCCAGCGCATCGTCGACGGCGACTCGGACGTCAAG AAGGCGCCGCCGCAGGTGATCGCCGCGGCCGAGTATTTCCTGCAGAACCGCAACGAGTGGGCGAGCCTGAACAAGATGGA CGACCCCGACAAGCGGGTGGGCAAGTCGGACTTCCTGCAGCGCGCCGCCTCGGCCGTGCACCTGAGCAAGGAAGATCTGC AGACCGTGTCGACCATCAACAGCAATCTCGACGTGTTCTTCAAGGACGGCCAGAAGATCACCCGCGACCGGCTGGCGTCG ATGTCGCAGGATGAGAGCCTGTCACCGGCCGTGCGCAACGCGGCCAAGCAGCTGCTGCAGGATCCGCTGCTGTACGGGCT GATCAACAACGCGAACTCGGGCTACAAGACGAAGAACGGCTTCTTCAGCTTCGGCGGCCCGACGGTGGATTCCGGCGTGA TCGGCAAGAAGGACTTCGAGAAGTTCATGTCGAGCATGACGGACGCCAACAAGACGGTCCAGGCGCGCAAGACGCATCCG GCGAACTCGGAGGCCAGCAAGAGCGCCGTTGCCGACATGGGCATGGGCATGGAAGACCAGCCCGACATCAAGGCGGTCAA GAAGAGCGGCGGCGCGCTGAAGAAGGCCATGGACAAGATCCTCACCATCTACTCGAAGGTGATGGACATCGCGTCGCAGG TCGTTGGTGCGCTGGGCGTGATTCCGGGGCTGGGTGAAATCGCGGACGCGCTGTCGATGGGGATGGCCGCTGGGGCCTCG GCGGCCAAGGTGCTGTCGACCCTGCTGAACGGGGGCAGCCTCAAGAAGGCGCTGGCGGAGGCGGGCATCAACCTGGCCTC CGCTGCGCTGGGGGCCGTCGCCGGACCGGAGGCGCGGGTGGCGCTCAAGAACGGCCTGACCAAGATGCTCGTGGAGAAGG TGGCCAACACCGGCATCGATCTGGCGGTCGACAAGGCGAAGTCGTTCGTGGATGGTTACCTGCAGGACCTGAAGGGCCGT CTGCACGCCACCGCGGCCAACGCCGTCAACACGGTCAACACCGGCGTCAACTGGGTGTCGGACAAGACGAAGGACTTCCT GGAGAACCCGGTGCAGAACCTGACGCCCCGTGTGAATATCCCCGGTATCACCCCGTATCAGCCGGGCTATCCGATGGTGG CGCCGGCGGCCTGA Protein sequence : MPGSLFFQFDHSTGSTRPDLPTDLFFSFGDSISRAVQDASNQSPEQAPAADPAPASPDGQSCQPSQPATPPVGSDVTWNG GTLNDTQLQIIGILNLHKDKGDISWDKLQDKINDPDTPPDLKWALQALSQDFNLFQAIGSQGDGRFGGKIKGKDLAEFAK SHSQVLTWNSGTLNDSQLEIMSILARHKDKMPVDWSSIQDKINDPSTPSDLKAALQALANDPALFFAIGSQGDGNCKGKI KAGDVSKFADNHPQVEEYNRKKAEGYVKNYIPSDAKPGDKPSAMTQNDALRELYRYSDYLPKKLDMEAFQRIVDGDSDVK KAPPQVIAAAEYFLQNRNEWASLNKMDDPDKRVGKSDFLQRAASAVHLSKEDLQTVSTINSNLDVFFKDGQKITRDRLAS MSQDESLSPAVRNAAKQLLQDPLLYGLINNANSGYKTKNGFFSFGGPTVDSGVIGKKDFEKFMSSMTDANKTVQARKTHP ANSEASKSAVADMGMGMEDQPDIKAVKKSGGALKKAMDKILTIYSKVMDIASQVVGALGVIPGLGEIADALSMGMAAGAS AAKVLSTLLNGGSLKKALAEAGINLASAALGAVAGPEARVALKNGLTKMLVEKVANTGIDLAVDKAKSFVDGYLQDLKGR LHATAANAVNTVNTGVNWVSDKTKDFLENPVQNLTPRVNIPGITPYQPGYPMVAPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpF | AAP34358.1 | HrpF | Virulence | Hrp PAI | Protein | 4e-119 | 49 |
| hrpF | BAB07869.1 | HrpF | Virulence | Hrp PAI | Protein | 1e-109 | 49 |
| hrpF | AAB86527.1 | HrpF | Virulence | Hrp PAI | Protein | 2e-110 | 49 |
| hrpF | YP_362142.1 | HrpF protein | Virulence | Hrp PAI | Protein | 3e-110 | 49 |
| hrpF | NP_640749.1 | HrpF protein | Virulence | Hrp PAI | Protein | 5e-119 | 48 |
