Gene Information

Name : F504_4906 (F504_4906)
Accession : YP_008238631.1
Strain :
Genome accession: NC_021745
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1804402 - 1805082 bp
Length : 681 bp
Strand : +
Note : FIG01031438

DNA sequence : 
ATGAACATTCTCGTCATTGAAGACGACGCCCGCGTCTCGGATTTCCTCTCGCGCGGCCTGCGGGCCGAAGGCTATCGCGT
GCTGCTCGCGCGCACCGGGCCCGAAGGCCTGCAGCTGGCCCGCACCGGCGAGCCCGCGCTGCTGCTGCTCGACCTGATGC
TGCCCGGCATGAGCGGCCTGGAGCTGTGCCAGACCCTGCGCGCGGAACGCAACCACGTGCCGATCCTGATGCTCACCTCG
CTGACCGATATCGACGATCGGGTCACCGGCCTGCGGCTGGGCGCGGACGACTACATGACCAAGCCCTTCGCGTTCGAAGA
GCTGCTCGCGCGCATCGAGGCGCTGCTGCGCCGCGGGCGCGAGCAGCGGCCGAAGGTCAACGTATTGCAGGTGGCGGACC
TGGTGCTCGACCGCGAGCGCATGCAGGTCACCCGCGCCGGCAAGCCCATCGCGCTCACCGCCAAGGAGCTGGCCTTCCTG
GAGCTGCTGATGAGCGCGCCCGGCCGCATCTACAGCCGCGAGCGCATCCTGTCGAACGTCTGGGGCGCCAACGAGGATCC
GCTGACCAACATCGTCGACGTCTACGTGCGCCGCCTGCGCAGCAAGATCGACGAGGGCCAGCCGGTGCCCCTGCTCAAGA
CCGTGCGCGGACTCGGCTATCGGCTCGACAGCGAGCCCTGA

Protein sequence : 
MNILVIEDDARVSDFLSRGLRAEGYRVLLARTGPEGLQLARTGEPALLLLDLMLPGMSGLELCQTLRAERNHVPILMLTS
LTDIDDRVTGLRLGADDYMTKPFAFEELLARIEALLRRGREQRPKVNVLQVADLVLDRERMQVTRAGKPIALTAKELAFL
ELLMSAPGRIYSRERILSNVWGANEDPLTNIVDVYVRRLRSKIDEGQPVPLLKTVRGLGYRLDSEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-26 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-26 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F504_4906 YP_008238631.1 DNA-binding response regulator BAC0083 Protein 4e-29 47
F504_4906 YP_008238631.1 DNA-binding response regulator BAC0197 Protein 1e-26 47
F504_4906 YP_008238631.1 DNA-binding response regulator BAC0638 Protein 6e-23 47
F504_4906 YP_008238631.1 DNA-binding response regulator BAC0111 Protein 1e-31 46
F504_4906 YP_008238631.1 DNA-binding response regulator BAC0308 Protein 1e-27 46
F504_4906 YP_008238631.1 DNA-binding response regulator BAC0347 Protein 2e-26 45
F504_4906 YP_008238631.1 DNA-binding response regulator BAC0125 Protein 4e-30 44
F504_4906 YP_008238631.1 DNA-binding response regulator HE999704.1.gene1528. Protein 1e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F504_4906 YP_008238631.1 DNA-binding response regulator VFG0596 Protein 4e-27 45
F504_4906 YP_008238631.1 DNA-binding response regulator VFG1390 Protein 2e-29 44