|
Name : clpA (lhe_0654) Accession : YP_008236105.1 Strain : Lactobacillus helveticus CNRZ32 Genome accession: NC_021744 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpA Function : - COG functional category : - COG ID : - EC number : - Position : 752553 - 754520 bp Length : 1968 bp Strand : - Note : - DNA sequence : ATGAATGAAAATAATCCAAGAATGCAAATGGGTGGAGGAAATGGAAACGGTAACCATGGTGGTAAAAGTCTATTAGACCA ATACGGTACTGATTTAACTGCCCTTGCTAAAAAAGGAAAAATTGATCCGGTTATCGGACGTGACAAAGAAATTGCCCGCG TAATTGAAATTTTAAATAGAAGAACTAAAAACAACCCTGTTTTAATTGGTGAAGCAGGTGTTGGTAAGACTGCTGTAGTT GAGGGCTTAGCCCAAGAGATCGTTGATGGCTCAGTTCCAGCTAAATTACAAAATAAACGTATCATTTCATTAAATGTAGT TTCACTTGTTCAAGGGACTGGTATTCGTGGTCAATTTGAACAACGAATGGAACAATTAATTAAAGAATTGCAACAAAATG ATGACATCATTTTATTCATTGATGAAATTCACGAAATTGTTGGTGCCGGTAACGCTGAAGGCGGTATGGATGCCGGAAAT ATTATCAAACCAGCCTTAGCTCGTGGTGAACTTCAATTAGTTGGTGCTACTACTATTAAGGAATACCGTGACATCGAAAA GGATTCAGCTTTAGCACGTAGATTCCAACCAGTTGAAGTAAAAGAACCAACTATTGATGAAACTATTCGTATTTTGAAAG GTATTCAACAACGCTACGAGGATTATCACCACGTTCATTACACCGATGATGCAATTGAAGCAGCCGCTAAATTGTCAGCC CGTTATATTCAAGACAGATTTTTACCTGATAAAGCCATCGACTTATTAGATGAAGCTGGTTCAAGAATGAACTTAACTAT TCCTTACATCGACAAAGATAAGATGCAAGAAAGGATCAACGCAGCTGAACAATTAAAGAAAGAAGCTTTAAAGAACGAAG ATTACGAAAAGGCTGCTTATTACCGCGATCAAATTGAAAAATACGAAAAAGTAAAGGATCAAAAAGTTGACCCAGATAAA TCTCCAGTCATTACCAACAAGATTATGAATAAGATTGTTGAAGAAAAAACTGGCATTCCTGTCGGCGATATTCAAAAGCA AGAAGAAAATCAATTGCGAAACTTAGCTAACGACTTAAAAGCTCATGTCATTGGACAAGACAAGGCAGTTGAAAAAGTTG CTCGTGCAATTCGCCGTAACAGAATTGGTTTTAACAAATCAGGTCGTCCAATCGGCTCCTTCCTCTTCGTAGGACCAACT GGTGTTGGTAAGACTGAACTTGCCAAACAATTAGCTAAGCAAATGTTTGGTTCAGAAAATGCCATGATCCGTTTCGATAT GTCTGAATACATGGAACAATATTCTGTTTCTAAATTAATCGGTTCTGCTCCTGGCTACGTTGGCTATGAAGAAGCAGGTC AATTAACTGAACAAGTAAGACATAATCCTTACAGCTTAATCTTGCTTGATGAAATTGAAAAAGCTCACCCAGATGTACTA AACTTGTTCTTACAAATTTTAGACGACGGACGCTTAACTGACTCACAAGGCAGAACAGTTTCATTCAAAGACACAATCAT CATTATGACTTCTAATGCAGGTCAAGGCATCAAGAATGCTAGTGTTGGTTTTACTGCAGAAAATGAAACCAAGTCTAAAG AATCTGCTAGAAACAATATGAGTCAATTCTTCAAGCCAGAGTTCTTAAACCGTCTAGACGATGTCATTGAATTCAATGAA TTAACTAAGCCAGACTTACTTAAGATTGTTGACTTAATGCTTAAGAACACTAATGATATGGTTAAAGACCAAGGCTTGCA TATCGATGTAATTCAAGCCGCTAAAGATAAATTAGTTGAAAAAGGATTCAATCCTGCATTAGGTGCTCGTCCACTTCGTC GGACAATTCAAGAAGAAATTGAAGACAATGTTGCAGACTTCAAGCTTGATCATACTGATAGCAAGAACTTAAAGGCTGAC GTGGTCGATGATAAAATCGTTATCAGCGATGAAAATGCGGCTGAATAA Protein sequence : MNENNPRMQMGGGNGNGNHGGKSLLDQYGTDLTALAKKGKIDPVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVV EGLAQEIVDGSVPAKLQNKRIISLNVVSLVQGTGIRGQFEQRMEQLIKELQQNDDIILFIDEIHEIVGAGNAEGGMDAGN IIKPALARGELQLVGATTIKEYRDIEKDSALARRFQPVEVKEPTIDETIRILKGIQQRYEDYHHVHYTDDAIEAAAKLSA RYIQDRFLPDKAIDLLDEAGSRMNLTIPYIDKDKMQERINAAEQLKKEALKNEDYEKAAYYRDQIEKYEKVKDQKVDPDK SPVITNKIMNKIVEEKTGIPVGDIQKQEENQLRNLANDLKAHVIGQDKAVEKVARAIRRNRIGFNKSGRPIGSFLFVGPT GVGKTELAKQLAKQMFGSENAMIRFDMSEYMEQYSVSKLIGSAPGYVGYEEAGQLTEQVRHNPYSLILLDEIEKAHPDVL NLFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGQGIKNASVGFTAENETKSKESARNNMSQFFKPEFLNRLDDVIEFNE LTKPDLLKIVDLMLKNTNDMVKDQGLHIDVIQAAKDKLVEKGFNPALGARPLRRTIQEEIEDNVADFKLDHTDSKNLKAD VVDDKIVISDENAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 9e-153 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_008236105.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0080 | Protein | 0.0 | 62 |
| clpA | YP_008236105.1 | ATP-dependent Clp protease ATP-binding subunit ClpA | VFG0079 | Protein | 9e-158 | 52 |
