Gene Information

Name : lhe_0043 (lhe_0043)
Accession : YP_008235574.1
Strain : Lactobacillus helveticus CNRZ32
Genome accession: NC_021744
Putative virulence/resistance : Virulence
Product : helix-turn-helix XRE-family-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 42672 - 42872 bp
Length : 201 bp
Strand : -
Note : -

DNA sequence : 
ATGAATCACGTAAGAGAATATCGTAAACAAAAAAAGATTTCACAAATGGAACTTGCTAAAAGAATAGGCGTAGCCAGGCA
GACTATTAATCTAATTGAAAACGATAAATATAATCCTTCACTTGAATTATGTTTAAGCTTAGCACATGTATTAGGCACAG
ATTTGAATAGTTTATTTTGGGATGGGGATGAACAACAATGA

Protein sequence : 
MNHVREYRKQKKISQMELAKRIGVARQTINLIENDKYNPSLELCLSLAHVLGTDLNSLFWDGDEQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-11 56
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-08 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-08 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lhe_0043 YP_008235574.1 helix-turn-helix XRE-family-like protein VFG2175 Protein 8e-09 50
lhe_0043 YP_008235574.1 helix-turn-helix XRE-family-like protein VFG2168 Protein 8e-09 50