Gene Information

Name : lhe_0340 (lhe_0340)
Accession : YP_008235837.1
Strain : Lactobacillus helveticus CNRZ32
Genome accession: NC_021744
Putative virulence/resistance : Resistance
Product : ABC transport protein ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 369444 - 370118 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAGTAATTGAGTTGAAAAATGTAGAAAAAATTTACGGTAAAGGCGATGCTCGAGTTGAAGCGTTAAAGGATATCAA
TTTTGAAGCCGATAAAAGCGAATTGGTTTTAATTATGGGACCGTCCGGTGCAGGTAAAAGTACTTTTTTAACGATTGCTG
GATCGCTGCAAAAACCAACTTCAGGCCAAGTTATCGTTAATGGGGAAGATATCAGCAAGTTTTCTGATAAAAAAAGAAAC
AACTTACGTTTAAATGAAATTGGTTTTATTTTACAAGCTTATAATTTAGTTCCATATCTGACTGTTCATGATCAATTTGT
TTTGGTTGATAAAGTTAAAAAAGAAGGTAATTTGTCCAAAGAAGATTTAGACAAATTGCTCAAAGATTTGGGGATTACTA
AATTAGTTAAAAAATATCCTAATGAATTGTCAGGCGGTCAGCAACAGCGTGTGGCAATTGCACGTGCACTTTATGCTAAT
CCTGCAATTTTGCTGGCTGATGAGCCTACGGCATCTCTTGATACGCAAAACGTAGAAGAGGTTGGCAAGTTGTTTAAGAA
ACTTGCTAAAGAACGTGAAAAAGCAATTTTGATTGTCACCCACGATCCTCGTCTTGAAAAATATGCGGATCATATTTATG
AGATGATGGATGGAAAAATGAGTCAAAAGAAATAA

Protein sequence : 
MAVIELKNVEKIYGKGDARVEALKDINFEADKSELVLIMGPSGAGKSTFLTIAGSLQKPTSGQVIVNGEDISKFSDKKRN
NLRLNEIGFILQAYNLVPYLTVHDQFVLVDKVKKEGNLSKEDLDKLLKDLGITKLVKKYPNELSGGQQQRVAIARALYAN
PAILLADEPTASLDTQNVEEVGKLFKKLAKEREKAILIVTHDPRLEKYADHIYEMMDGKMSQKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-44 51
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 3e-40 49
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lhe_0340 YP_008235837.1 ABC transport protein ATPase component CP001581.1.gene798.p Protein 1e-32 43