Gene Information

Name : lhe_1803 (lhe_1803)
Accession : YP_008237103.1
Strain : Lactobacillus helveticus CNRZ32
Genome accession: NC_021744
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2061932 - 2063482 bp
Length : 1551 bp
Strand : -
Note : -

DNA sequence :
TTGGCAAAGAAGGAAATGAATGACCAATTACGTGTTCGTCGTCAAAAGATGGACGAAATGCGTGAAAACGGAATTGAACC
ATTCGGTCAAAGAAAGTTTGATCGTCAAGATTTGGCAAGTACTTTGGAAGAAAAGTATGGTAAAGAAGATGAAGACGAAT
TAAACGATGATATGCCTAAGACTAAGATTGCAGGTCGTATGCTTGCAAAACGTGGTAAGGGTAAAGTAGGTTTTGCAGAC
CTTTACGACCGTACTGGTAAGATTCAAATTTATGTACGTAAAGACATCGTAGGCGAAGACAACTACAATATCTTCAAGAA
GTCAGATATTGGTGATTTCTTGGGTATTGATGGGGAAGTTATGAAAACCGATACTGGTGAGTTGACTGTTCGTGCTACTC
ACGTAACCTTCTTATCTAAGGCTCTTCGTCCTTTGCCAGACAAGTACCACGGCTTGAAGGATGTTGAAGCAATCTACCGT
CAACGTTACCTTGACTTGATTACTAATTGCGATAGCTACATGCGTTTTGTTCACCGTACTCAAATTATCCAAGCTATTCG
TGATTACTTGAATAAGCAAAACTTCTTGGAAGTTGAAACTCCAGTATTGCACAACATTCCAGGTGGTGCTGAAGCTCGTC
CATTTATTACTCACCACAACGCTTTGGATATTGACCTTTACATGAGAATTGCTTTGGAACTTCCACTGAAGCGTTTGATT
GTTGGTGATATGGAACGTGTTTACGAAATCGGTCGTGTATTCAGAAACGAAGGTTTGGACACTCACCACAACCCAGAATT
TACTGAACTTGAAAGTTATGCTGCATACTGGGACTTCCACGATGTTATGGACGAAGCAGAAGGCATTATTCGTGCTGCAG
CTAAGGTTGTTTCAGATGATGGCAAGATTACTTACCAAGGTCAAGACATTGACTTAGGCAAGCCATTCCGTCGCATTCAC
ATGGTTGATTTAATCAAGGAAAAGACCGGCGTTGATTTCTGGAAGCCAATGACTCTTGAAGAAGCAACTAAGATTGCTGA
AGATCACGATATTCATGTTGAAAAGTTCTGGAAGGTTGGCCACATTATTAACGCTTTCTTTGAAAAGTACTGTGAAGAAA
CTATTGTTGACCCAACATTTGTTTACGGTCACCCAGTAGAAATTTCACCACTTGCTAAGAAGAATGCTGACGATCCAAGA
TTTACTGACCGTTTCGAAATTTACATCATGGGTGAAGAATACGGTAACGCCTTCTCAGAATTGAACGATCCTGATGATCA
ACGTGCTCGTTTCGAAGCTCAAATGGAAGAACGTGAAGCAGGTAACGATGAAGCTGATATGGTTGATGAAGATTACCTTC
GTGCTATGGAATACGGTATGCCACCTACAGGTGGTTTGGGTATCGGCATTGACCGTTTGGTAATGCTTTTGACTGATGCT
CCAGCTATTCGTGATGTTTTGCTCTTCCCAACAATGCGTCCAGAACGTGCTGAATCAATTGATGCCGAAGTTAAGGCTGA
TTTAGCTAAGAAGAATAAAGAAAACAAGTAG

Protein sequence :
MAKKEMNDQLRVRRQKMDEMRENGIEPFGQRKFDRQDLASTLEEKYGKEDEDELNDDMPKTKIAGRMLAKRGKGKVGFAD
LYDRTGKIQIYVRKDIVGEDNYNIFKKSDIGDFLGIDGEVMKTDTGELTVRATHVTFLSKALRPLPDKYHGLKDVEAIYR
QRYLDLITNCDSYMRFVHRTQIIQAIRDYLNKQNFLEVETPVLHNIPGGAEARPFITHHNALDIDLYMRIALELPLKRLI
VGDMERVYEIGRVFRNEGLDTHHNPEFTELESYAAYWDFHDVMDEAEGIIRAAAKVVSDDGKITYQGQDIDLGKPFRRIH
MVDLIKEKTGVDFWKPMTLEEATKIAEDHDIHVEKFWKVGHIINAFFEKYCEETIVDPTFVYGHPVEISPLAKKNADDPR
FTDRFEIYIMGEEYGNAFSELNDPDDQRARFEAQMEEREAGNDEADMVDEDYLRAMEYGMPPTGGLGIGIDRLVMLLTDA
PAIRDVLLFPTMRPERAESIDAEVKADLAKKNKENK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 4e-109 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lhe_1803 YP_008237103.1 lysyl-tRNA synthetase VFG1668 Protein 2e-109 47