|
Name : polA (lhe_1495) Accession : YP_008236858.1 Strain : Lactobacillus helveticus CNRZ32 Genome accession: NC_021744 Putative virulence/resistance : Unknown Product : DNA polymerase I PolA Function : - COG functional category : - COG ID : - EC number : - Position : 1751964 - 1754627 bp Length : 2664 bp Strand : - Note : - DNA sequence : ATGGCAGATAAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGA ATCTTTCAAGAGTCCGGATGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACG TTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGTTGAATACAAAGGT GGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAAC TTATGAATTGAAGAATTATGAAGCAGATGACATCATTGGTACTTTTGCTGCGAAGGGTGAAAAGGTCGGGTTCACAACCA CGATCGTAACTGGTGACCGCGACTTAACTCAACTTGCTTCGCCTTCCACTACTGTTGAAGTGACAAAATCCGGTGTTTCT CAACTTGAAGCTTACACTCCAGAACACATGAAGGAAGTTAATGGCGTAACTCCAACCGAATTCATCGACATGAAGGCTTT GATGGGTGATAATTCCGATAATTACCCTGGTGTAACTAAAGTTGGTCCTAAGACTGCATCACGTTTGATTCAAAAATACG GTTCCGTTGAAGGGATTTACGATCATATCGACGAAATGAAGAAGTCCAAGCTGAAAGAAAACTTGATCAACGATAAGGAC AAAGCATTTTTAGCTAAAAAGTTAGCAACTATTGACCGTGATTCACCAGTAACTCTGGATATTGATGATATAAAACGTCA GCCAGTTGATTATGAAAAGCTGCGTCAATTCTATGAAAAGATGAACTTCCGTAAGTTCTTAGCTGACCTAAATGCTTCAG GTGCTGGTCAAGATAGTACTGAAGTTGAAAAAGTAGAATACATCGTTTTAAACGACGACAACGTTAAAGATGTTAAAGCT ACTGAAGCTGATACCATTGAATTTTACTTAGAAATGCTTGGTGCCAACTATCACCTAGCTCCTTTTGTTGGCTTCAGTTT GAAGATCAATGACAAGATCTACGTTTCAAGAGACGTGGAATTGCTTGAAGAAGATAATATCAAGCACATCTTAGAAGACG AAAAGATTAAGAAGAATGTCTTTGACCTGAAGAGAACAATGGTTGCTGCACATCGTTTGGGCATTCACACTCACGGCCTT GATTACGACATGCTTTTGGCATCCTACTTGATCAATAATGAAAACAACTCTAATGATCTTGGTGAAATTGCCCATCTTTA TGGGGATTATTCCGTTAAGACTGACCTTGAAGTCTACGGCAAAGGTAAGAGTGAACACATCCCTGATGACGATGATGAAT TATTCAACCACTTAGCTTCCAAGGTCAACGCCATTGAATCACTCAAGAAGACTCTGCTTGAAAAGCTCAAAGACCACGAA CAAGATGCCTTGTTTGATACGATCGAAATCCCAACCGCGCGCGTTTTAGCCAGAATGGAAATGAACGGGATGAAGGTCGA AGCAAGTACTTTAATTCAACTGCAAAATGAATTTGCCGTTAAATTGAAGGAACTCGAAGACAAGATTTATGGCCAAGCCG GTGAAAAGTTCAACTTGAACTCACCAAAGCAATTAGGTCACATTTTGTTTGAAAAGCTTGGTTTGCCAGTCATCAAGAAG ACCAAGACTGGTTATTCAACTGCAGTTGAAGTGCTCGATCAATTGAAGACGCAAAGCCCAATCGTTAGCGAAATTTTGGA CTATCGTCAAATTGCCAAGATTCAATCTACCTATGTAAAGGGTCTGCTTGACGTCATTCAACCAGATGGCCGCGTGCACA CACGTTACTTGCAGACTTTGACTGCAACTGGTCGACTTTCTAGTGTGGATCCTAACTTGCAAAACATCCCTACCCGCACC GAAGAAGGAAAGCAAATCAGAAAGGCCTTCGTGCCAAGTGAACCAGACGGCTACATCTTCTCTTGCGACTACTCACAAGT TGAACTCCGTGTGCTCGCCCATGTTTCTGGTGATCAAAACATGCAAGAAGCCTTCAAGACCGGGTATGACATCCACTCAC ACACCGCGATGAAGATCTTCCACTTGGAGTCACCGGATGAGGTAACACCACTGATGCGTCGTCACGCCAAGGCAGTTAAC TTCGGTATCGTCTACGGTATTTCCGATTATGGTTTGTCCAAGAATTTAGGTATTTCTAGGAAACGTGCGCAAGAATTTAT CGATAATTATTTTGAACAATATCCTCAAATCGAGGATTACATGAATAAAGCAGTACAAGAAGCACGTGACAAGGGCTATG CGGAAACGATCATGCATCGCCGCAGATATTTGCCAGATATTCATGCTAAGAAATACACTGTCCGTGCTTTTGCGGAAAGA ACTGCCATTAATTCTCCAATTCAAGGTTCAGCTGCCGATATTATCAAAATCGCTATGATCAATATGCAAAAGAAGCTTGA TGAATTGCACCTTAAGACCAAGATGGTTATTCAGGTGCACGACGAATTGATTTTTGATGTGCCAAAAGACGAACTGGAAA CAATCAAGAAGATCGTGCCCGAAGTAATGCAATCAGCAGTTAAGCTTGATGTGCCATTAATTGCTGATTCTGGTTGGGGA CACAATTGGTATGATGCAAAGTAG Protein sequence : MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDVDPTHVLVAFDAGKVTFRTKMYVEYKG GRAKTPEELLEQMPYIQEMLHDLGIKTYELKNYEADDIIGTFAAKGEKVGFTTTIVTGDRDLTQLASPSTTVEVTKSGVS QLEAYTPEHMKEVNGVTPTEFIDMKALMGDNSDNYPGVTKVGPKTASRLIQKYGSVEGIYDHIDEMKKSKLKENLINDKD KAFLAKKLATIDRDSPVTLDIDDIKRQPVDYEKLRQFYEKMNFRKFLADLNASGAGQDSTEVEKVEYIVLNDDNVKDVKA TEADTIEFYLEMLGANYHLAPFVGFSLKINDKIYVSRDVELLEEDNIKHILEDEKIKKNVFDLKRTMVAAHRLGIHTHGL DYDMLLASYLINNENNSNDLGEIAHLYGDYSVKTDLEVYGKGKSEHIPDDDDELFNHLASKVNAIESLKKTLLEKLKDHE QDALFDTIEIPTARVLARMEMNGMKVEASTLIQLQNEFAVKLKELEDKIYGQAGEKFNLNSPKQLGHILFEKLGLPVIKK TKTGYSTAVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVKGLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRT EEGKQIRKAFVPSEPDGYIFSCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMKIFHLESPDEVTPLMRRHAKAVN FGIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIEDYMNKAVQEARDKGYAETIMHRRRYLPDIHAKKYTVRAFAER TAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVIQVHDELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWG HNWYDAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 0.0 | 54 |
