Gene Information

Name : lhe_0959 (lhe_0959)
Accession : YP_008236377.1
Strain : Lactobacillus helveticus CNRZ32
Genome accession: NC_021744
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1126244 - 1127149 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence :
ATGGAGAAGAATAAGTTACAAGATCAAATTGATGATTATTTACGATATAGCCAAATTGAACGTGGTTTAAGCAGCAATAC
GATTACTGCCTACCGTCAAGATTTGGAAGAATACTTAGCTTTTGTAAAAAAAGAAGGCATGGATTCGTGGCCCACTGAAG
CTAGTGATGTAGATGCTTTTTTGGCAAGACAGTACGATTTAAATAAAGCCACAAGTTCAATCAGTCGTCTTATTTCTAGC
ATGCGTAAATTTTATCAATGGCTTGCGCGTCAAAATATTCAAAAATTAAATCCAATGCTTGAGATTGATTTGCCTAAAAA
AGAACGCCGTCTTCCTGTAGCTTTGAATCAAAAAGAAATTAATGATTTGCTTGCTCAACCTGATATTAAACGGAAATTAG
GCTTAAGAGATCGAGCAATTTTAGAGACTTTATATGCTACAGGTATGCGTGTAAGTGAATTGATTAATTTAGAATTACAA
GACCTGCATGAAGATTTGGGTTTAGTTAGAGTACTGGGAAAGGGTTCTAAGGAGCGCTTAATACCAATTAGCTCAGTAGC
TTTGCATTGGATAAAACAATATCAAAAAGAAGTGCGTGATCCGCTAATTTTGAAAGCTGGACAAAATGATGAGCATATTT
TCTTGAATAGCAGGGCCAAGCAGCTTACGCGTCAGGCAATTTGGCAAATGATAAAAAAGTATTGTCAATCTGCCGGTATT
ACCAAAGATGTTACACCTCATACATTACGTCACACCTTTGCTACACATCTGCTTGAAAATGGTGCGGACTTACGAGTCGT
TCAAGAAATTTTAGGACACTCAGATATAAGCACTACTCAAATTTATACTAATTTGTCTCAAAAACATATTTTACAGGTAT
ATCAAAAGACGCATCCTCGTCTTTAG

Protein sequence :
MEKNKLQDQIDDYLRYSQIERGLSSNTITAYRQDLEEYLAFVKKEGMDSWPTEASDVDAFLARQYDLNKATSSISRLISS
MRKFYQWLARQNIQKLNPMLEIDLPKKERRLPVALNQKEINDLLAQPDIKRKLGLRDRAILETLYATGMRVSELINLELQ
DLHEDLGLVRVLGKGSKERLIPISSVALHWIKQYQKEVRDPLILKAGQNDEHIFLNSRAKQLTRQAIWQMIKKYCQSAGI
TKDVTPHTLRHTFATHLLENGADLRVVQEILGHSDISTTQIYTNLSQKHILQVYQKTHPRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-51 42
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-51 42