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Name : F382_03170 (F382_03170) Accession : YP_008233516.1 Strain : Mannheimia haemolytica D153 Genome accession: NC_021743 Putative virulence/resistance : Unknown Product : type I restriction endonuclease HindVIIP subunit M Function : - COG functional category : - COG ID : - EC number : - Position : 613760 - 615661 bp Length : 1902 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCCAAACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACA GCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACA GCACAGCACAGCACAGCACAGCACAGCACAGCAGCCAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCACAGCA CAGCACAGCACAGCACAGCGTGATCTCAACGCTGACACAAGTCAAGCCTTTTTAAACGAACTCGACCAAACCCTCTGGAC TGCCGCCGACAAACTGCGTAAAAACCTCGATGCCGCCAACTACAAACACATCGTTCTTGGCTTTATCTTCCTAAAATACA TCTCCGACAGCTTTACCGATTTCCAAGCCAAGCTAAAAACCCAGCTTACCACCCCCGAAAGCGAACTCTATCTTGACCCT GCACTATTTGACGAACAAGAATTTAGCCAAATTCTTGCCGAAGAGTTGGAACAGAGAGATTACTACGCCGCTGAAAACAT CTTTTGGGTGCCGGAGCAAGCCCGCTGGGACAACATCAAATCATTAAGCAAACTCAATCTTGGCGATGAATTGCCTTGGG GAGACAAATTTAAAGGTGTCAGCCGCTTGATTGATGATGCCTTTGAAGCCATCGAACGGGAAAACCCCAAACTCAAAGGC GTACTCCAACGCATTGCCGGCTTTGGCGTGCCTGATGAAATGCTCACAGGCTTAATTGACCTGTTCTCACGCACCAATTT CACCCAGCCTATGCACAATGGCGAACCTGTGCATCTGCAAGCCAAAGACATTTTAGGGCACGTCTATGAATACTTTCTTG GGCAATTTGCCCTTGCCGAAGGCAAAAAAGGCGGTCAATACTTCACGCCAAAATCCATCGTTACCCTGATTGTTGAAATG CTCGAACCCTATTCAGGGCGGATTTACGACCCAGCTATGGGCAGCGGCGGCTTTTTTGTGCAAGCTGACCGCTTTATTCA GGCTCACGCAGGCAACCGCAACGCCATTTCCGTTTATGGGCAAGAATCCAACTCCACCACTCGCAAACTGGCGGTGATGA ATATGGCGATTCGTGGTATTCCCTTTGACTTTGGCGACAAGCCCGAAGATACCCTACTAAACCCTTTGCACATCGACAAA AAAATGGATGTTGTGATGGCAAATCCGCCCTTTAACCAAAAAGAGTGGTGGAATGAAAGCCTAGCAAACGATCCACGCTG GGCATACGGCACACCGCCGCAAGGCAACGCCAACTTTGCGTGGTTGCAACATATGATTTACCACCTCTCCCCCAAAGGCA AAATGGCACTCCTGCTCGCCAACGGCTCAATGAGCAGCCAAACTTCAGGCGAAGGCGACATTCGCAAAAACATCGTGCAA GCTGACCTTGTCGAAGCGATGATTGCCCTGCCCAATCAGCTATTCACCAACACCCAAATCCCTGCCTGCATTTGGATTAT CAATAAAGCCAAAGCCAGAAAAGGTGAAGTGCTGTTTATCAACGCCACCCAAATAGGCTACCTGAAGGACCGCGTCTTGC GTGATTTTACCGCTGATGACATCGCCAAAATCAGCGACACCTACCACAACTGGCAAAAACAGAACGGCTACGAAAATATC CCTGCGTTTTGTTATTGTGCCACGCTGGACGAAATCGCCAAAAACGATTTTGTGCTGACCGCAGGGCGATATGTCGGTGC GGTACAAGAAGAAAATGACGGCGTGCCGTTTGCAGAAAAAATGCAGGAATTGACCGCTTTATTGAATGAACAATTTAAAC AAGGGCGGGAATTGGAACAGCAAATCGCAGAGAATTTAAAGGGGTTGGGATATGGCATTTAA Protein sequence : MPNSTAQHSTAQHSTAQHSTAQHSTAQHSTAQHSTAQHSTAQHSTAQHSTAQHSTAQHSTAQHSSQHSTAQHSTAQHSTA QHSTAQRDLNADTSQAFLNELDQTLWTAADKLRKNLDAANYKHIVLGFIFLKYISDSFTDFQAKLKTQLTTPESELYLDP ALFDEQEFSQILAEELEQRDYYAAENIFWVPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKG VLQRIAGFGVPDEMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGGQYFTPKSIVTLIVEM LEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAISVYGQESNSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDK KMDVVMANPPFNQKEWWNESLANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIVQ ADLVEAMIALPNQLFTNTQIPACIWIINKAKARKGEVLFINATQIGYLKDRVLRDFTADDIAKISDTYHNWQKQNGYENI PAFCYCATLDEIAKNDFVLTAGRYVGAVQEENDGVPFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-169 | 61 |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-115 | 47 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 4e-114 | 46 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-115 | 45 |
