Gene Information

Name : F382_02240 (F382_02240)
Accession : YP_008233331.1
Strain : Mannheimia haemolytica D153
Genome accession: NC_021743
Putative virulence/resistance : Unknown
Product : Presumed portal vertex protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 427303 - 428343 bp
Length : 1041 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAAAACAATTGCGCAAAAATTTAACCCAAAATGACCGCTTACAACCGCAAGCACAAACCGAAATTTTCAGTTTTGG
TGACCCGATTCCGGTGTTAGACCGTGCCGATATTCTCAATTATTTGGAGTGTTCGGCGATGTATGAGAAATGGTATAACC
CACCGATGAGCTTTGATGGCTTGGCGAAATCGTTAAGGTCATCAACACACCACGAAAGTGCGATCATCACCAAAGCAAAT
ATTTTGCTTTCCACTTGCGAGGTTGATAGCCGTTATTTATCACGCCGTGATTTGTCATCGTTTGTTAAAGATTATTTAGT
ATTTGGCAACGCCTATTTTGAGGTGGTGCGAAATCGCCTTGGGCAGGTACAGCGAATCGAATCACCTTTGGCAAAATATG
TGCGAAAGGGTTTAGAGGCTGGTCAATTTTACTATGTGCCACAACGATTCGATCACCAAGAACACGAATTTGCCAAAGGC
TCAATCTATCACTTGCTTGAGCCTGATATTAATCAAGATATTTACGGCTTGCCACAATATCTTTCGGCCCTGCAATCTGC
GTGGTTAAATGAGAGTGCTACTCTGTTTCGCCGTAAGTATTTTTTAAATGGAGCTCACGCCGGCTTTGTGTTTTATATGA
GCGATGCGTCACAAAAACAAGAAGATGTTGAAAATATTCGCCAGCAGCTCAAGCAGTCAAAAGGGGTGGGGAATTTTAAA
AACTTGTTCGTCCACGCACCAAACGGCAAGAAAGATGGAATACAGATTATTCCGATTGCTGATGTGTCGGCAAAAGATGA
GTTTTTTAATATCAAGAACGTGAGCCGTGATGATGTGTTAGCTGCTCACCGTGTGCCACCACAACTGATGGGGATTATCC
CAAATAACACCGGCGGTTTTGGCAACGTGGCTGATGCTGCCGAGGTGTTTTTTATCACCGAGATTGAGCCATTGCAAGAG
CGATTGAAAGAGTTTAATCAGTGGTTAGGTCAAGAGGTTATCAAATTTAAACCGTCTAAATTGTTACAGCGGACACAATA
A

Protein sequence :
MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLECSAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKAN
ILLSTCEVDSRYLSRRDLSSFVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKG
SIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVENIRQQLKQSKGVGNFK
NLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQE
RLKEFNQWLGQEVIKFKPSKLLQRTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 5e-97 61
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 5e-97 61
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 4e-77 55