Gene Information

Name : F382_13580 (F382_13580)
Accession : YP_008235514.1
Strain : Mannheimia haemolytica D153
Genome accession: NC_021743
Putative virulence/resistance : Unknown
Product : conjugative transfer protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2665558 - 2666439 bp
Length : 882 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAACGTCTACCAATTTTATTCGCTTCTTTACTAATAAGCTTCTCTGGGAGTAGCTTTGCTGATGTCTTGATGAAATG
GGAAAGAAAACCCTTGCCTATTGCATTGCAAGTGGAAAAAGAACGAATCATTTTTGTCGATAAAAATGTCAAAGTTGGCT
ATCCGGCTGAATTAGATGGCAAATTACGCATTCAATCAACGGGTGGCGCAGTGTACTTAAAAGCCCTAGAGACATTCCCT
TCTACCCGTATTGAATTTCGTGATGTTTCTACAGGTGAAATTTTCCTCTTTGATATTGTTTCTGCAACCAAAGTAGCTAA
TCCGGAAGAATCAATACGAATGGTATTTGATAGTGCGGTAGAAAAACAATCTTTTTCAACGAATAGAGATGATGAACCTG
ATCTATCTTTGACCGGCACACGACCACAATTACCGATACCGGCAGCATTAACCCGTTATGCCGCACAATCACTTTATGCG
CCACTGCGTGCAGTTGAGCCTTTAGAAGGAGTTCGTCGTGTAGCACATCGACTTCCGAAAAAAATTACCACATTGCTCCC
TGCGTATTCGATAGAGGCAACACCTTTAATCAGCTGGCAATTGGACGAATATGTAGTCACGGCTATTCGTCTACAAAACA
AAGGTAATAGTCAAATTACACTCGATCCTCGAGAACTTCAAGGACAATTTTATGCTGCAACTTTCCAGCATAATTGGCTT
GGAGGATATGGAGGGAATGAAGATACCACAACCCTGTATTTAGTGACGGAAGGCTATGCTAATAATGCGCTTATTCCGGA
AACTCACCCTGTTAAACCCGTCGGTAAGAAAGTGAAAAAAACAACAAAAGTTGAAACTAAACCGACTCAATCGGCGAAGT
AG

Protein sequence :
MKRLPILFASLLISFSGSSFADVLMKWERKPLPIALQVEKERIIFVDKNVKVGYPAELDGKLRIQSTGGAVYLKALETFP
STRIEFRDVSTGEIFLFDIVSATKVANPEESIRMVFDSAVEKQSFSTNRDDEPDLSLTGTRPQLPIPAALTRYAAQSLYA
PLRAVEPLEGVRRVAHRLPKKITTLLPAYSIEATPLISWQLDEYVVTAIRLQNKGNSQITLDPRELQGQFYAATFQHNWL
GGYGGNEDTTTLYLVTEGYANNALIPETHPVKPVGKKVKKTTKVETKPTQSAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 5e-116 90
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 1e-56 49
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 4e-56 48
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 6e-55 48
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 4e-54 47
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 4e-54 47
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-52 47
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 3e-55 47
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-52 46
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-52 46
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-49 44
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-40 44
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 4e-48 43