|
Name : F382_12985 (F382_12985) Accession : YP_008235399.1 Strain : Mannheimia haemolytica D153 Genome accession: NC_021743 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2548044 - 2549351 bp Length : 1308 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGATCGACCAAAACCTACTTCGTACCAATTTAGAAGACGTTGCTACAGCTCTTAAAATCAAACGTAATTTTATTTTAGA TGTAGAGCGAGTAAAAACCCTTGAAGAACAGCGTAAAACGCTACAAGTTAAAACCGAAACCTTACAAGCAGAACGCAACA CTCGCTCCAAAAACATCGGTGCGGCAAAAGCTCGTGGCGAAGATATTTCAGCTTTATTAGCCGAAGTAGATTCAATGGGC AACGAATTAGACACGGCAAAAGTAGAATTGGATAAAGTACAGGCAGAAATCCGTGAGTTGTTGCTTTCTGTGCCAAACTT ACCGGCAGATGAAGTACCACTCGGTAAAGACGATAGCGAAAACTTAGAAGTATTACGTTGGGGCGAACCACGTCAATTCG ACTTTGAAGTTCAAGATCACGTTACCCTTGGCGAAAACTTAAACGGTTTAGATTTTGCTGCCGGTGTAAAATTAACCGCC AGCCGTTTTGTGGTAATGAAAGGTAAACTTGCCCGCTTACACCGTGCATTATCTCAATTTATGTTGGATTTACACACTGA ACAACACGGCTATGTGGAAACCAATGTGCCATTTTTAGTCAATCACGACACTCTATACGGCACAGGTCAGCTACCAAAAT TTGGCGAAGATTTATTCCATACTCAACCATTAACAGGGCAAGATCCAAACGAGGTGCAACGCCCATTCGGTTTGATTCCA ACCGCTGAAGTGCCAGTAACGAACTTAGTGCGAGATGAAATCATTGATGAAGACAGCTTACCACTGCGTTATACCGCCCA CACCCCTTGTTTCCGTGCAGAAGCCGGTTCTTATGGGCGTGATACTCGTGGTTTAATTCGTATGCACCAATTTGAAAAAG TGGAAATGGTGCAAATTGTCGCCCCTGAAAAATCAATGGAAGCCTTAGAAGAATTAACCGGTCACGCAGAAAAAGTCTTA CAGCTTTTAGGCTTGCCATACCGCAAAGTGCTACTCTGCACTGGTGATATGGGCTTTGGTGCAGCAAAAACCTACGACTT AGAAGTTTGGCTACCGGCACAAAACACTTACCGTGAGATTTCTTCTTGCTCAAATATGTGGGATTTCCAAGCCCGCCGAA TGTCTGCACGTTGTAAAGCTAAAGGCGACAAGAAAACTCGCTTGGTTCACACCTTAAACGGCTCAGGTTTAGCGGTTGGT CGCACACTGGTCGCTGTGTTAGAAAACTACCAAAATGCCGATGGCTCTATTACTGTGCCTGAGGTGTTAAGACCTTATAT GGGTGGTTTGGAAGTAATTACCGCTTAA Protein sequence : MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVKTETLQAERNTRSKNIGAAKARGEDISALLAEVDSMG NELDTAKVELDKVQAEIRELLLSVPNLPADEVPLGKDDSENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTA SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDLFHTQPLTGQDPNEVQRPFGLIP TAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAGSYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVL QLLGLPYRKVLLCTGDMGFGAAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTLNGSGLAVG RTLVAVLENYQNADGSITVPEVLRPYMGGLEVITA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-105 | 54 |
