|
Name : F382_10580 (F382_10580) Accession : YP_008234921.1 Strain : Mannheimia haemolytica D153 Genome accession: NC_021743 Putative virulence/resistance : Virulence Product : iron ABC transporter permease Function : - COG functional category : - COG ID : - EC number : - Position : 2076610 - 2077419 bp Length : 810 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCTTAATTGGATTTTAGAGCCGTTGCAATTTGAATTTATGCAAATTGCGTTAATTACCGCAATTTTAGTTGCTGGCGT GAGTGCGGTTTTATCTTGCTATCTGGTGCTGAAAGGCTGGTCTTTAATGGGCGATGCAATTTCGCACGCTGTTCTGCCCG GTGTGGTGATTTCCTCACTTGCCGGGTTACCACTCTCAATAGGGGCGTTTTTTTCAGGATTAGGCTGTGCCTTATCGGTG GGCTATTTAAAAGAAAATAGTCGCTTGAAAGAAGACACGGTAATGGGGATTGTGTTTTCAGGTATGTTTGCCTTTGGGAT CTTGCTGTTTACCGCCTTTAATACCGGTGAGCATTTAACCCATATTTTATTTGGTAATCTATTAGGCGTAACCAAAAGCG ATTTGCTTCAGACTTTACTCATAAGCCTCTTTACCTTTGTGGTGATGGTGGCGAAACGCAAAGACTTCTTGCTCTATTGC TTTGATGTTAATCAAGCCAAAGTAGCAGGCTTACCGGTTAGATTATTGCATTATGGTTTACTTTCCTTGCTTGCTTTAAC TATTATCAGTGCAATGCAAGTGGTGGGCGTGATTTTAGTGGTGGCAATGTTGATTACCCCGGGGATCACTGCTTACCTGC TGACTAAGCGGTTTGATAGTATGTTACTGATTGCCTTAGGCGTTGCGATATTTTCATCGGTATTCGGCACGTTGCTTAGC TACCATATTGATGCCGCAACAGGGCCGACGATTATTCTCGTGCAAGCGGCCATTTTTTTCCTCAGTTTTGCATATTCTAA GATTCATTGA Protein sequence : MLNWILEPLQFEFMQIALITAILVAGVSAVLSCYLVLKGWSLMGDAISHAVLPGVVISSLAGLPLSIGAFFSGLGCALSV GYLKENSRLKEDTVMGIVFSGMFAFGILLFTAFNTGEHLTHILFGNLLGVTKSDLLQTLLISLFTFVVMVAKRKDFLLYC FDVNQAKVAGLPVRLLHYGLLSLLALTIISAMQVVGVILVVAMLITPGITAYLLTKRFDSMLLIALGVAIFSSVFGTLLS YHIDAATGPTIILVQAAIFFLSFAYSKIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-51 | 50 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-51 | 50 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 9e-52 | 50 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 5e-52 | 50 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 3e-52 | 50 |
| ef0094 | AAM75297.1 | EF0094 | Not tested | Not named | Protein | 7e-32 | 43 |
| EF0576 | NP_814341.1 | cation ABC transporter permease | Not tested | Not named | Protein | 1e-31 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| F382_10580 | YP_008234921.1 | iron ABC transporter permease | BAC0442 | Protein | 3e-69 | 61 |
| F382_10580 | YP_008234921.1 | iron ABC transporter permease | BAC0352 | Protein | 2e-52 | 50 |
| F382_10580 | YP_008234921.1 | iron ABC transporter permease | BAC0441 | Protein | 4e-40 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| F382_10580 | YP_008234921.1 | iron ABC transporter permease | VFG0528 | Protein | 2e-52 | 50 |
