Gene Information

Name : sgbE (F382_08690)
Accession : YP_008234561.1
Strain : Mannheimia haemolytica D153
Genome accession: NC_021743
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 1691081 - 1691800 bp
Length : 720 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGACGCAATTAACTGAATTAACCCCTGCATTACAAGCCTTAAGAGAGCGTGTGTTAAAAGCCAATTTAGAATTACCGAA
GTATGGCTTGGTAACTTTCACTTGGGGTAACGTAAGTGAAATCGACCGTGAGACCGGTTTAGTCGCCATCAAACCTTCCG
GCGTAGAATACGATGCGATGACGGTGGAAGACATTGTATTGGTTGATTTACAAGGTAATCGAGTTTACGGAGATAAAAAA
CCGTCTTCTGATACAGAAACGCACTTAGAACTTTATCGCCAATTCACTGATATTGGCGGTGTGGTACACACTCACTCTCG
CAATGCTGTAGGTTGGGCACAAGCAGGGCGTGATTTATTGGCACTTGGCACCACTCAAGGCGATTATTTCTACGGTGCGA
TTCCTTGTACTCGCAAAATGACCGCAGAGGAAATTGCCGGCAGTTATGAGCTGGAAACCGGAAAGGTGATTGTCGAAACT
TTCCGAACTCGAGGTATTGAACCGAAAGCAGTTCCAGGTGTGTTGGTACATTCACACGGTCCATTTACCTGGGGAAAAGA
TGGACACGATGCTGTGCATAATTCTGTGGTATTAGAAGAGGTGGCTTACATGAATTTTATTAGCCATCAAATTCGCCCAC
AAATTGGCCCAATGCAACAGGAATTATTAGATAAGCATTATCTGCGTAAGCATGGTGCAAATGCTTATTATGGGCAATAG

Protein sequence :
MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRETGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKK
PSSDTETHLELYRQFTDIGGVVHTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET
FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPMQQELLDKHYLRKHGANAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-66 60