Gene Information

Name : M495_03900 (M495_03900)
Accession : YP_008228747.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : MFS transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 843493 - 844647 bp
Length : 1155 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGTGCGCCGGGCTGCTGGGTATCGGGCAAAACGGCCTGCTGGTGGCGTTGCCGGTGCTGGTCAGCATGACCCAGCTGTC
GCTTTCAGTCTGGGCCGGGCTATTGACGCTCGGCTCGATGCTGTTTTTGGTGGGGTCACCCTGGTGGGGCAGGCAGTCTG
AAATTCGCGGCTGCAAGTTCGTAGTAACCATGGCGTTAGCAGGGTATTTGTTCAGTTTTGCTTTACTGGCACTGGCGGTT
TGGGGGTTGGCGGCTGGCTGGCTTTCATCGACGCTGGGGCTGGGCGGCCTGATTGCGGCACGCATTATCTACGGGCTGAC
GGTATCCGGCATGGTGCCGGCCAGCCAGACCTGGGCGCTCCAGCGTGCCGGCTATGAACAGCGTATGTCGGCGCTGGCGA
CCATCAGTTCCGGGCTGAGCTGCGGGCGACTGTTGGGGCCGCTGTGCGCCGCGCTGGCGTTGTCGATTCATCCGATGGCG
CCGCTGTGGTTGATGGCGCTTGCGCCATTGATCGCCCTATTGGTAGTGTGCCGCCAGCATAACGATCCACCGCTGCCGCC
GGTTGCCCATCAGCAAAACCGACTTCGCCTCAATATGGTGCCTTACCTGCTGTGCGCACTGTTGCTGGCCGCGTCGGTCA
GCTTGATGCAATTGGGATTGGCACCGCATTTGACCGGTTTATTCAGTCATTCCGCCACCACCGTCAGTCATCACGTTGCG
GTGTTGCTGAGCGTGGCGGCGGCCTGTACGCTGTTGGCTCAGTTTCTGGTGGTGCGCCCGCAGCGTTTTAGCGCGTCGCA
GCTGCTGCTGATTGCCGCCGTGCTGATGATAGTGGGACTGGGCCTGATGTGCGCTCAGCCTTTGGCGCTATTCTATGTTG
GTTGCGCACTGGCCTCTTTTGGCGCTGCCATGGCGACGCCGGGCTATCAACTGATGTTGAACGAGAAATTGTCTACCGGC
AAAGGGTCGGGGGCCATTGCTACCAGCCATACGCTGGGTTACGGCCTGAGCGCATTGATGGTGCCGGTGGTGGCCAAATT
TTATGGTGAGTCGCAGCTGATTGCGGCGGCTTTGACGATGGCGGTTCTGCTGGGGGGCATCAGCGGCTGGCTGTGGCGCC
AGCACCGCATCAGTGCAAATTCTGCGGGAGAGTAA

Protein sequence :
MCAGLLGIGQNGLLVALPVLVSMTQLSLSVWAGLLTLGSMLFLVGSPWWGRQSEIRGCKFVVTMALAGYLFSFALLALAV
WGLAAGWLSSTLGLGGLIAARIIYGLTVSGMVPASQTWALQRAGYEQRMSALATISSGLSCGRLLGPLCAALALSIHPMA
PLWLMALAPLIALLVVCRQHNDPPLPPVAHQQNRLRLNMVPYLLCALLLAASVSLMQLGLAPHLTGLFSHSATTVSHHVA
VLLSVAAACTLLAQFLVVRPQRFSASQLLLIAAVLMIVGLGLMCAQPLALFYVGCALASFGAAMATPGYQLMLNEKLSTG
KGSGAIATSHTLGYGLSALMVPVVAKFYGESQLIAAALTMAVLLGGISGWLWRQHRISANSAGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
imm NP_839224.1 membrane transport protein Not tested SHI-2 Protein 2e-60 58
imm NP_709453.1 membrane transport protein Not tested SHI-2 Protein 2e-60 58
shiF YP_002414047.1 putative membrane transport protein, major facilitator superfamily Not tested Not named Protein 2e-60 58
unnamed AAD54670.1 unknown Not tested SHI-2 Protein 3e-60 58
shiF AAD44744.1 ShiF Virulence SHI-2 Protein 2e-60 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_03900 YP_008228747.1 MFS transporter VFG0614 Protein 1e-60 58