Gene Information

Name : M495_03895 (M495_03895)
Accession : YP_008228746.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : aerobactin synthase IucA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 841541 - 843286 bp
Length : 1746 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACAATCCAGTTTGAAACCGCGACGACCGACGTGGCTGCGCAATGTTTTCTCAACGCGTTGATGCGTGAAACCCGGGA
CTGGCAAATCGTTCCGGCGGCCAACAACCAACAGTATCCGCAGCTTCATATTCCACTTTCGCCTTCTCAGGCTATCCGCA
TCACTTTACGTCACACCTCCCCCACCCAACATCACCAGTATCTGTTCCCTGCCCGCTTGCATCAGCAAGACGACGGCGCT
GGTGTTGCGCTGAGCGTGGAGCAACTGGTGACCCTGTTGCTGGAAAAACCGTCGTTGAAGGGGGAACTGCCGGATGAGGT
CGTTACCCGTTTCCGCCAGCGCGTACTGGAGAGTCATGACAATACCCAACAGGCGATCGCGGTTCGCCTGGACTGGCCGA
CGCTGCGCGACAAGCCGCTCAACTTCGCTCAGGCGGAACAGGGGCTGTTGGTAGGCCACGCCTTCCACCCGGCGCCTAAA
TCCCATGAACCTTTCGACGAACAGCAGGCGCGCCGTTACCTGCCAGATTTTGGTGCCCGTTTCCCGCTGCGCTGGTTTGC
CGTCGATAAAAACCACCTGTGCGGCGACAGCCTGAACCTGACGTTGCAGCAGCGCCTGCAGCGTTTTGCCGCCGAAAGCG
CGCCGCAACTGCTGGCGCATTTTACCGATGACGTCTGGCTGTTGCCGATGCATCCGTGGCAGGCCGACCATTTGCTGACG
CAGACCTGGTGCCAGGAACTGGTGACCCAGGGATTGCTCAGCGATCTGGGCGAAGCCGGCGAGCGCTGGCTGCCAACCAG
CTCTTCCCGCTCGCTGTACAGCGCCAGCAATCGCGACATGATTAAATTCTCCCTCAGCGTGCGCCTGACCAACTCGGTGC
GTACCCTGTCGGTAAAAGAAGTGAAGCGCGGCATCCGTTTGGCTCGTTTGGCGCAAACGCCACGTTGGCAGCAACTGCAG
GCACGTTATCCCACCTTCCGCGTGATGCAGGAAGACGGCTGGGCCGGGCTGCGCGCTGCGGACGGGACGATTCAGGAAGA
AAGCCTGATGGCACTGCGCGATAACCTGCTGTTTGAGCAGCCGGAAAGCCAGACCAATGTGCTGGTGACCCTGACCCAGG
CCGCACCGGACGGCGGTGACAGCCTGCTGGCAGCGGCGGTGCGGCGTTTAGCCGCCAGACTGAATCTGCCGGTGCAACAG
GCCGCTCATACCTGGCTGGATGCTTACTGCCAACACGTCTTACTGCCGCTGTTCAGCACCGAAGCCGATTACGGGCTGGT
GCTGCTGGCCCACCAACAAAATATTCTGGTGGAAATGCAGCAGGATCTGCCGATCGGCATGCTGTATCGCGACTGTCAGG
GCAGCGGCTTTACCCGCGATGCCGGGCCGTGGTTAGAAGAAATTGGCGAGGCCGAGGCGGAAAATCGCTTCAGCGAACAG
CAGTTACTGCGTTACTTCCCTTACTACCTGCTGGTGAACTCCAGCCTGGCGGTCACTGCGGCGTTAGCCGCGGCCAGTTT
CGACACTGAAGAACAGCTGATGGCCCGGGTGCGCGATGCGCTGAGTGGTCTGCGTGCCAACGCCAAAAACACCCTGTGTC
TGGACTACGTCCTCGACAGCAGCCACTGGAACTGCAAAGGCAACTTCTTCTGTTATCTGCATGACCACAACGAAAACACC
ATCGTCGATCCGGCGGTGATTTATTTCGACTTCGTCAACCCGCTGCGCCAGGGAGCCGCTCAATGA

Protein sequence :
MTIQFETATTDVAAQCFLNALMRETRDWQIVPAANNQQYPQLHIPLSPSQAIRITLRHTSPTQHHQYLFPARLHQQDDGA
GVALSVEQLVTLLLEKPSLKGELPDEVVTRFRQRVLESHDNTQQAIAVRLDWPTLRDKPLNFAQAEQGLLVGHAFHPAPK
SHEPFDEQQARRYLPDFGARFPLRWFAVDKNHLCGDSLNLTLQQRLQRFAAESAPQLLAHFTDDVWLLPMHPWQADHLLT
QTWCQELVTQGLLSDLGEAGERWLPTSSSRSLYSASNRDMIKFSLSVRLTNSVRTLSVKEVKRGIRLARLAQTPRWQQLQ
ARYPTFRVMQEDGWAGLRAADGTIQEESLMALRDNLLFEQPESQTNVLVTLTQAAPDGGDSLLAAAVRRLAARLNLPVQQ
AAHTWLDAYCQHVLLPLFSTEADYGLVLLAHQQNILVEMQQDLPIGMLYRDCQGSGFTRDAGPWLEEIGEAEAENRFSEQ
QLLRYFPYYLLVNSSLAVTAALAAASFDTEEQLMARVRDALSGLRANAKNTLCLDYVLDSSHWNCKGNFFCYLHDHNENT
IVDPAVIYFDFVNPLRQGAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucA NP_839223.1 siderophore biosynthesis protein Virulence SHI-2 Protein 7e-167 65
iucA NP_709454.2 siderophore biosynthesis protein Virulence SHI-2 Protein 7e-167 65
iucA AAD44746.1 IucA Virulence SHI-2 Protein 5e-167 65
iucA YP_002414046.1 aerobactin siderophore biosynthesis protein Virulence Not named Protein 4e-167 65
iucA AAK71631.1 IucA Virulence SHI-3 Protein 2e-150 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_03895 YP_008228746.1 aerobactin synthase IucA VFG0615 Protein 3e-167 65
M495_03895 YP_008228746.1 aerobactin synthase IucA VFG0940 Protein 2e-167 65
M495_03895 YP_008228746.1 aerobactin synthase IucA VFG1081 Protein 1e-150 61