Gene Information

Name : M495_03880 (M495_03880)
Accession : YP_008228743.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : lysine 6-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 837524 - 838852 bp
Length : 1329 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAATCAGCCCCTGGATTTCATCGGCATTGGTATCGGCCCGTTCAACCTCAGCATTGCCGCACTCGGCAGTGAAGTTGC
CGGTTTTAACAGTAAATTCCTCGAACGCAAGCCGCACTTTTCCTGGCATCCCGGCATGATGGTGCCGGATTGCCATATGC
AGACCAGCTTCCTGAAAGATCTGGTCAGCGCGGTATCGCCAACCAATCCCTACAGCTTTCTTAACTACCTGGTGAAAAGG
AAGAAGTTTTATCGATTCCTGACCACCGAGCTGCGTACGGTGTCGCGCGAAGAGTTCGCCGACTACCTCGACTGGGCCGC
CAACGGGCTGAAGTCGCTGGAGTTCAGTCAGGATATTCAGAGCGTCGATTTTGACGACCAGCAGCGCCAATTCGTCGTCA
CTACCCAGCGTGCGACTTACCGGGCGCGCCACGTCTGCCTGGGCATAGGCAAACGCATCAAACTGCCGGACTGCGTTACC
GAGCAAAACGATCGCTGCTTCCATGCCAGCGAAATGACGATGCGCAACCCGAACCTGGCCGGAAAACGCGTCACCATCGT
CGGTGGCGGCCAGAGCGGTGCAGACCTGTTCCTGAACATCTTCCGCGCCGAATGGGGGCAGCCTGCGCAACTGAATTGGA
TCTCGCGCCGCAATAACTATAACGCGCTGGATGAAGCCGCCTTCGCCAACGAGTACTTCACGCCGGACTACGTTGACAGC
TTCTATGGCCTGAACGACGGTGCCAAGCAGCGCATGCTGACCGAGCAGAAGATGACCTCTGACGGCATCACCAGCGATTC
GCTGCTGGCTATTTACCGCGCGATGTATCACCAGTTTGAAGTGTTGCGCGAAAAGCCCTGGGCGCACCTGCTGCCAAGCC
GCTCGCTGGCGGCAATCCAGGCCGCAGGCGATGGCTGGCAGTTGGTTACCCATCACCATCTTGATCAGGGTAAAGAAACC
TTCGACACCGACGTGGTGATTTTCGCCACCGGCTATCAGCAGGATCGTCCGGCGTTCCTCGAACCGCTGGCCAATCGCCT
GCTAACCACCGCCGATGACCAGTTCCGCGTAGCCCCCGACTTCAGCCTGGAGTGGGAAGGCCCCAAGGAAAACTGCCTGT
TTGCCGTTAATGCCGGCATGCACAGCCACGGCATCGCCGAACCCCAACTCAGCCTGATGGCCTGGCGTTCGGCACGCATT
CTCAACCGGGCTTTAGGACGCGACCAGTTCGATTTAACGTCCACCCCGGCTGTGATCCAATGGCGTAGTCGGCAGCCGGG
TATTCCGTCCCGCGCCGAGCACGTCATGCTCAATTACACCGAGTTTTAA

Protein sequence : 
MNQPLDFIGIGIGPFNLSIAALGSEVAGFNSKFLERKPHFSWHPGMMVPDCHMQTSFLKDLVSAVSPTNPYSFLNYLVKR
KKFYRFLTTELRTVSREEFADYLDWAANGLKSLEFSQDIQSVDFDDQQRQFVVTTQRATYRARHVCLGIGKRIKLPDCVT
EQNDRCFHASEMTMRNPNLAGKRVTIVGGGQSGADLFLNIFRAEWGQPAQLNWISRRNNYNALDEAAFANEYFTPDYVDS
FYGLNDGAKQRMLTEQKMTSDGITSDSLLAIYRAMYHQFEVLREKPWAHLLPSRSLAAIQAAGDGWQLVTHHHLDQGKET
FDTDVVIFATGYQQDRPAFLEPLANRLLTTADDQFRVAPDFSLEWEGPKENCLFAVNAGMHSHGIAEPQLSLMAWRSARI
LNRALGRDQFDLTSTPAVIQWRSRQPGIPSRAEHVMLNYTEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD AAK71634.1 IucD Virulence SHI-3 Protein 1e-143 61
iucD AAD44749.1 IucD Virulence SHI-2 Protein 7e-144 61
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-143 61
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 1e-143 61
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 6e-144 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_03880 YP_008228743.1 lysine 6-monooxygenase VFG1084 Protein 6e-144 61
M495_03880 YP_008228743.1 lysine 6-monooxygenase VFG0618 Protein 4e-144 61
M495_03880 YP_008228743.1 lysine 6-monooxygenase VFG0937 Protein 3e-144 61