Gene Information

Name : M495_03505 (M495_03505)
Accession : YP_008228678.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 763164 - 765719 bp
Length : 2556 bp
Strand : -
Note : This protein performs the mismatch recognition step during the DNA repair process; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAATAGCACCGACAAGCTCGATTCACACACGCCGATGATGCAGCAGTACCTGCGCCTCAAGGCTCAGCATCCCGAGAT
CCTGCTGTTCTACCGCATGGGCGACTTTTACGAGCTGTTCTATGATGATGCCAAGCGCGCGTCCCAACTGCTGGATATCT
CGCTGACCAAACGCGGTGCCTCAGCAGGGGAGCCTATTCCCATGGCCGGCGTTCCCCATCATGCGGTGGAAAACTATTTA
GCCAAACTGGTGCAGCTTGGCGAATCCGTTGCCCTGTGCGAACAAATCGGCGATCCGGCCACCAGTAAAGGTCCGGTTGA
GCGCAAAGTGGTGCGTATTGTCACGCCTGGCACCATCACCGACGAAGCCTTGCTACAGGAGCGTCAGGACAACCTGCTGG
CCGCCATCTGGCAAGACGCACGTGGCTTTGGTTACGCGACGCTGGATATCAGCTCCGGCCGTTTCCGCGTTGCCGAACCA
GCAGATATTGAGACCATGGCGGCCGAGTTGCAACGCACCAACCCCGCCGAGCTGCTTTATCCCGAAACCTTTGAACAGAT
GTCGCTGATTGAACAGCGCCATGGTCTGCGTCGTCGCCCGCTGTGGGAATTCGAACCGGAGACCGCCCGTCAGCAGCTTA
ACCTGCAGTTCGGCACTCGCGATCTTACCGGCTTCGGCGTTGAACAGGCCCATCAGGCACTGCGTGCCGCCGGCTGCCTG
CTGCAGTACGTAAAAGATACCCAGCGCACCTCATTGCCGCACATCCGTGGTATCACCATGGAGCGTCAACAGGACGGCAT
CATCATGGACGCCGCCACCCGGCGTAACCTCGAGCTGACCCAGAGCCTGTCCGGCGGCACTGAAAACACCCTCGCGGCGA
TCCTCGATCACAGCGTCACGGCCATGGGCAGCCGCATGCTTAAGCGCTGGCTGCATATGCCTACTCGTGACATCAAGGTA
CTGAATGATCGTCAGCAAGCCATAGGCGCACTGCAGGATCTGTATGCTGAACTGCAACCTTCTTTGCGTCAGGTCGGCGA
TCTGGAACGTATCCTCGCCCGTCTGGCGTTGCGCAGCGCACGTCCGCGCGATCTGGCACGCATGCGTCATGCCTTCCAGC
AGCTACCGGATATCCATGCGCTGTTAAAAGGCGTAAATACTCCGCATGTGCAGCACCTGCTGTCCCAGGTGGGTCAGTTT
GATGAACTGCAGGACTTGCTAGAACGCGCCGTGGTGGAAGCCCCGCCGGTGCTGGTTCGCGACGGTGGCGTTATCGCCCC
CGGCTACAACAGTGAACTGGACGAATGGCGAGCCTTGGCCGATGGTGCCAGCGACTATCTCGACCGTCTCGAGATCCGCG
AGCGCGAAAAACTGGGGCTGGACACGCTGAAGGTCGGTTTCAATGGTGTTCATGGCTATTACATTCAGGTCAGTCGCGGG
CAAAGCCACCTGGTACCGATCCATTACGTACGCCGTCAGACGCTGAAAAACGCCGAACGCTACATCATTCCCGAACTGAA
AGAGTACGAAGACAAGGTGCTGACCTCTAAAGGGAAAGCACTGGCCATCGAGAAAGGTCTGTACGAAGAACTGTTCGATT
TGCTGTTGCCGCATCTGGGTGAGTTGCAACAAAGCGCGGCGGCATTGGCAGAACTGGACGTGCTGGCCAACCTGGCTGAA
CGCGCCGAAACGCTAAACTACGCCTGCCCGACCATGAGCGAGCAGCCTGGCGTGCGCATCACCGAAGGTCGCCACCCGGT
GGTGGAGCAGGTGTTGAGCGAACCCTTTATTTCCAACCCGCTGTCACTGTCGCCCCAACGCCGAATGTTGATCATCACCG
GCCCTAACATGGGCGGTAAAAGTACCTATATGCGCCAAACGGCGCTGATCGTACTGATGGCCCATATCGGCAGCTACGTG
CCAGCAAGCAAGGCAGTCATTGGCCCGGTCGATCGCATATTTACCCGCGTAGGTGCAGCGGACGATCTGGCTTCCGGCCG
CTCCACCTTTATGGTTGAGATGACCGAAACGGCCAATATCCTGCATAACGCCACCGAACATAGTCTGGTGTTGATGGACG
AGATTGGCCGCGGCACCTCGACCTATGATGGTTTATCCCTGGCCTGGGCCTGTGCCGAAAATCTGGCCAGCCGCATCAAG
GCCATGACCTTGTTCGCCACTCATTACTTTGAGCTGACCACTCTGCCGGAAAAAATGGAAGGCGTGGTTAACGTGCATTT
GGATGCGCTTGAGCACGGTGACACCATCGCCTTTATGCACAGCGTGCAGGACGGTGCCGCCAGCAAAAGTTACGGGCTGG
CGGTTGCCGCACTGGCCGGGGTGCCACGTGAAGTGATCAAACGCGCACGCCAGAAATTGCGTGAACTGGAGGCTATCTCC
AACCATACCGCCAGCGGTACCGTTGACGCCACTCAGATGACGCTGCTGAATGAGGAAACCTCACCGGCGGTTGAAGCACT
TGAGGCTCTGGATCCGGATTCATTGTCTCCGCGCCAGGCACTGGAATGGATTTATCGCCTGAAGAATATGGTCTAG

Protein sequence :
MNSTDKLDSHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHHAVENYL
AKLVQLGESVALCEQIGDPATSKGPVERKVVRIVTPGTITDEALLQERQDNLLAAIWQDARGFGYATLDISSGRFRVAEP
ADIETMAAELQRTNPAELLYPETFEQMSLIEQRHGLRRRPLWEFEPETARQQLNLQFGTRDLTGFGVEQAHQALRAAGCL
LQYVKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQSLSGGTENTLAAILDHSVTAMGSRMLKRWLHMPTRDIKV
LNDRQQAIGALQDLYAELQPSLRQVGDLERILARLALRSARPRDLARMRHAFQQLPDIHALLKGVNTPHVQHLLSQVGQF
DELQDLLERAVVEAPPVLVRDGGVIAPGYNSELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG
QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALAIEKGLYEELFDLLLPHLGELQQSAAALAELDVLANLAE
RAETLNYACPTMSEQPGVRITEGRHPVVEQVLSEPFISNPLSLSPQRRMLIITGPNMGGKSTYMRQTALIVLMAHIGSYV
PASKAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLASRIK
AMTLFATHYFELTTLPEKMEGVVNVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPREVIKRARQKLRELEAIS
NHTASGTVDATQMTLLNEETSPAVEALEALDPDSLSPRQALEWIYRLKNMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_03505 YP_008228678.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 85