Gene Information

Name : M495_24705 (M495_24705)
Accession : YP_008232826.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : lysine 6-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5214702 - 5216015 bp
Length : 1314 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAATGAACCACTGGATTTACTCGGCGTCGGCCTTGGCCCTTTCAACCTCAGCCTGGCGGCGTTGGCCTATGAAAGTGG
TGCACTGAATTATGCCTTTCTCGATCGCAACGCCAGCTTCCGTTGGCATCCCGGCATGCTGCTCCCTTCCGCCTATATGC
AGACCTATGTGTTGCAGGACCTGGTTACGGCGGTAACGCCTCGCAGCCAATTCTCCTTTATCAATTACCTGGTCGAGCAG
AAAAAAATTTATCGTTTTCTGATTACCGAACAGCAAATTATCAGCCGTGAAGAGTTCTCCGACTATTTGAGCTGGGCCTG
TAATAGATTAGAAGGGTTACAGTTTTCGCAGTCGGTTGAAAGCATCGATTTTGATGATGAAAAACAGCTGTTCAAAGTAC
GCACCCGTGACCAAACCCTGTGGGCGAAGAATATCTGTCTGGGCACCGGCCACGACCCCTGGCTGCCTGAGGAGTTTTAT
CCGGCGCTGGGCGAAAACTGCCTGCATGCCGCCGAAATCGGCCTGCGTAATCCGGATCTGACCGGTAAGCGGGTGGCGGT
GATTGGCGGCGGCCAAAGCGGTGCCGATATTTTTCTGAACGCGCTGCGGGGGCACTGGGGCGAACCGGCACAGCTCGACT
GGATTTCCCGTCGGCCCAATTTTCAGCCGCTGGACGAGTCTGCCTTCACCAATGAATATTTCACCCCGGAGTACGTCGAT
TATTTCTATACGCTGCCGCAGGATATCCGCGAGCGCGAACTCAAGACTCAGAAACTGCCGGCCGACGGTATTAGCAACCA
TACGCTACGTACTTTGTACCGGGAGCTTTATATGCGTTTCGATGTGATGCACCAGCCGCGCAACGTGCGTCTTTTGCCGC
ATCGCACTCTGCTGGCGATCGAGCCGACAGGCAAAGGGTTCCAATTGCGAACCCGACACGGTCTTGAAAATCGTCAGGAA
GGATTCAATGCCGATGTCGTCATTTTAGCAACCGGTTATCGCCCTTCACTCCCTGCCTATTTAAAACCCCTGTTGCCACG
CATTCCTTTCGACGACCAACAACACTTGCCGTTACTGCCCGATTTTAACCTCGAATGGCAGGGGCCTGAGCAGAATCGCA
TTTATGCGGTGAATGCCGGTATCCACAGCCACGGCAGCGCGGAAGGCGGGCTCAGCCTGATGGCCTGGCGCTCAGCACGC
ATTCTGAATCATCTGCTCGGTAAACCCCATTTTGATCTGGCACCAAACGCCTCGCTGATCCAATGGTGGAGCGGCGCTGC
CCCGGACGATGATATTACTCAAACAGATAAATAG

Protein sequence :
MNEPLDLLGVGLGPFNLSLAALAYESGALNYAFLDRNASFRWHPGMLLPSAYMQTYVLQDLVTAVTPRSQFSFINYLVEQ
KKIYRFLITEQQIISREEFSDYLSWACNRLEGLQFSQSVESIDFDDEKQLFKVRTRDQTLWAKNICLGTGHDPWLPEEFY
PALGENCLHAAEIGLRNPDLTGKRVAVIGGGQSGADIFLNALRGHWGEPAQLDWISRRPNFQPLDESAFTNEYFTPEYVD
YFYTLPQDIRERELKTQKLPADGISNHTLRTLYRELYMRFDVMHQPRNVRLLPHRTLLAIEPTGKGFQLRTRHGLENRQE
GFNADVVILATGYRPSLPAYLKPLLPRIPFDDQQHLPLLPDFNLEWQGPEQNRIYAVNAGIHSHGSAEGGLSLMAWRSAR
ILNHLLGKPHFDLAPNASLIQWWSGAAPDDDITQTDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 6e-115 54
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 6e-115 54
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 4e-115 54
iucD AAD44749.1 IucD Virulence SHI-2 Protein 5e-115 54
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-115 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_24705 YP_008232826.1 lysine 6-monooxygenase VFG0937 Protein 2e-115 54
M495_24705 YP_008232826.1 lysine 6-monooxygenase VFG0618 Protein 3e-115 54
M495_24705 YP_008232826.1 lysine 6-monooxygenase VFG1084 Protein 1e-115 54