Gene Information

Name : M495_02465 (M495_02465)
Accession : YP_008228473.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradative operon repressor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 532173 - 532658 bp
Length : 486 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :

ATGACGAACACCTTTATAGCCAAGGCCAAATCTATGCATGAGTCCTTAACCATTGCCCTGCTGCAAGCGCGTGAAACCGC
CATGGGCTTTTTTCGCCCGATCCTGAAAAGCCATAACCTGACCGAACAGCAATGGCGCATCATTCGCGTTTTGGCCAACA
GTCGTTCGATCGAATTCCACGAATTGGCAGCAGAAACCTGCATCCTGCGCCCCAGCCTGACCGGCATTTTGTCGCGCATG
GAACGCGATAAGCTGATTTTCCGCCTGAAACCGGTTAACGATCAGCGCAAGCTGTACGTGTCTCTCACCCAGCAGGGTCA
GGAGCTGTATGAAGTGGCGCGCCACCAGGTAGAACAGGGGTACGCTGAAATCGAAGCCGCATTTTCACAGCAGAAAATGG
ACCAGTTGATGACCTTACTGGACGAGCTGATCACCCTGGGGGATAAACTGCCCGCCAACGTGACCGCTCATCCCACAAAG
AAATGA

Protein sequence :

MTNTFIAKAKSMHESLTIALLQARETAMGFFRPILKSHNLTEQQWRIIRVLANSRSIEFHELAAETCILRPSLTGILSRM
ERDKLIFRLKPVNDQRKLYVSLTQQGQELYEVARHQVEQGYAEIEAAFSQQKMDQLMTLLDELITLGDKLPANVTAHPTK
K

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hpcR	AAO17176.1	HpcR	Not tested	tcd island	Protein	1e-51	78

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
M495_02465	YP_008228473.1	homoprotocatechuate degradative operon repressor	BAC0505	Protein	1e-33	51