Gene Information

Name : M495_23555 (M495_23555)
Accession : YP_008232607.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : molecular chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4955120 - 4955875 bp
Length : 756 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGATTATGAACAACGTTCCGTTAGCAAAAATGGCCGCGCTGGGCCTGGCTTTGACCGCAGCAGTACCGGCCGCCAACGC
AGCGATATCGCTGGATCGTACTCGCGCCGTTTACCTCAGCGACGCGAAATCAATCAGCCTGAATATCGTCAACGAAAACA
AGGAACTGCCTTTCCTGGCGCAGTCCTGGCTGGAAAACGAGCAGCACCAGAAAATCACTTCGCCGCTGGTGGTGTTACCG
CCGTTGCAGCGGGTTGAAGCCAATGAACGCAGCGTGGTGCGCATCACCAAGACGCCGGAGGCCGATCGTCTGCCGCAAGA
TCGCGAGTCGGTGTTCTATTTCAACCTGCGTGAAATTCCGCCGAAAAGCAGTAAAACCAACGTGATGCAGTTGGCACTGC
AAACCCAGATCAAACTGTTTTATCGGCCAAAAGCCATCGTCGCGCCAAAAGGCGAAGTGTGGCAGGAGAAGCTGGTATTT
CGCAAAAGCACCGGCGGTTTCACCGTTGAAAACCCTACGCCGTTTTACATCACCCTGACCGGCATGACTCGCCAAACGCA
GAAACAGGGCGGCGGCGCGCTGGGCGACTTCCAGCCGGTGATGCTGAAACCGAAATCGAGCGAAACCATTAAGGTGCGCG
ACAACGGCCTCAACAGCTTTGTCATCACCTATATCAATGACTACGGCGGTCACCCGGAGCTGCGCTTCGCCTGTAACGGC
AGCGTGTGCAACGCCGTGCCTGAGACCAAAAAATAA

Protein sequence :
MIMNNVPLAKMAALGLALTAAVPAANAAISLDRTRAVYLSDAKSISLNIVNENKELPFLAQSWLENEQHQKITSPLVVLP
PLQRVEANERSVVRITKTPEADRLPQDRESVFYFNLREIPPKSSKTNVMQLALQTQIKLFYRPKAIVAPKGEVWQEKLVF
RKSTGGFTVENPTPFYITLTGMTRQTQKQGGGALGDFQPVMLKPKSSETIKVRDNGLNSFVITYINDYGGHPELRFACNG
SVCNAVPETKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixD CAE85158.1 PixD protein Not tested PAI V 536 Protein 2e-59 55
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 2e-58 53
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-58 53
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 3e-58 53
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-58 53
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 4e-58 53
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 4e-58 53
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 2e-54 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_23555 YP_008232607.1 molecular chaperone VFG1547 Protein 9e-59 53
M495_23555 YP_008232607.1 molecular chaperone VFG0896 Protein 2e-58 53
M495_23555 YP_008232607.1 molecular chaperone VFG0885 Protein 9e-55 52