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Name : gabD (M495_21680) Accession : YP_008232241.1 Strain : Serratia liquefaciens ATCC 27592 Genome accession: NC_021741 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 4566321 - 4567775 bp Length : 1455 bp Strand : - Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAATTGAATAACCCCGAGCTGCTGCGCAGCCAGTGCCTGATTAACGGCGAGTGGTGCGATGCGCTGAGCGGTAAACG TGAAGCGGTCATCAATCCGGCGACCGGCGTTGAGCTGGCCAGTATTCCGTTAGTCAGCGGCGAAGAAACTCAACAGGCGA TTAACGCTGCGCAGGTTGCGCAGCAAGGTTGGAAACAACTGACCGCCAAACAGCGTTCCGCTCTGATGCTGACCTGGGCC GACAAGGTGCTGGCGGCGCAGGAAGATCTGGCCCAGTTGATGACCGCGGAGCAGGGCAAATCGCTGGCGGAAGCGCGCGG TGAAGTGGCCTATGCCGCATCGTTTATCACCTGGTTTGCTGAAGAAGCCAAGCGAGTGGACGGCGCGGTACTGCAAGCGC CGCAGGCTTCACAACGTCTGGTGGTGGTAAAACAGCCCATCGGCGTTTGTGCGGCGATCACTCCGTGGAACTTCCCGGCG GCGATGATCACCCGCAAGGTGGCGCCGGCGCTGGCAGCAGGTTGCGCAATTATCGTTAAACCGGCCGAACAAACGCCGCT GACCGCGCTGGCGTTGGGCAAGCTGGCGCAGGACGCCGGCATTCCGGCGGGGGTGCTGCAGATCGTGACCGGCGATGCCG CTCAGGTGGGTAAAGTATTGTGTGACAGCCCGGTGGTGCGCAAGTTGAGCTTTACCGGTTCGACCGAGGTCGGCCGCATT CTGATGGCGCAGTGCGCGCCAACCATCAAAAAGCTATCGCTGGAGCTGGGCGGCAATGCGCCGGTGATCGTTTTCGACGA CGCCAATCTGGACGCGGCCGTGGCGGGCATTATGGCCTCCAAATTCCGCAATAGCGGCCAGACCTGCGTCTGCGCCAACC GCATCTACGTGCAGGACGGTATCTATGACCGGCTGGTGGATAAGCTGGTGGTGGCGGTCGAGCAACTGAAGGTCGGTGAC GGCAGTCAGGCGGGCACCACTCAGGGCCCGTTGATTGACCAGGATGCGGTGGAAAAAGTGCAGAGCCATATCGACGATGC ATTGATCAAGGGCGCGCAAATCGCTATCGGCGGTCAGCCGCACGAACTGGGTCGCACCTTCTTCCAGCCTACGGTGGTGA CTGGCGTGACGCAGAAAATGCGCTTCGCCAAAGAGGAAACCTTTGGCCCGGTGGCACCGCTGTTCCGTTTCCATGACGAG GCGGAAGCTATCGCCATGGCCAACGATACCGAGTTCGGGTTGGCCGCCTATCTGTTCACGCAGAACGCCTCGCGTCAATG GCGAGTGCCGGAGGCGTTGGAATACGGCATGGTCGGCATCAATACCGGGCTGATTTCCAATGAAGTGGCACCTTTTGGCG GCGTGAAGCAGTCAGGGCTCGGACGTGAAGGATCGCGTTACGGGATTGAAGAATATCTGGAGCTGAAATACCTGTGTATC GATGTGAGCTGTTAA Protein sequence : MKLNNPELLRSQCLINGEWCDALSGKREAVINPATGVELASIPLVSGEETQQAINAAQVAQQGWKQLTAKQRSALMLTWA DKVLAAQEDLAQLMTAEQGKSLAEARGEVAYAASFITWFAEEAKRVDGAVLQAPQASQRLVVVKQPIGVCAAITPWNFPA AMITRKVAPALAAGCAIIVKPAEQTPLTALALGKLAQDAGIPAGVLQIVTGDAAQVGKVLCDSPVVRKLSFTGSTEVGRI LMAQCAPTIKKLSLELGGNAPVIVFDDANLDAAVAGIMASKFRNSGQTCVCANRIYVQDGIYDRLVDKLVVAVEQLKVGD GSQAGTTQGPLIDQDAVEKVQSHIDDALIKGAQIAIGGQPHELGRTFFQPTVVTGVTQKMRFAKEETFGPVAPLFRFHDE AEAIAMANDTEFGLAAYLFTQNASRQWRVPEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSRYGIEEYLELKYLCI DVSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-141 | 63 |
