|
Name : M495_19665 (M495_19665) Accession : YP_008231846.1 Strain : Serratia liquefaciens ATCC 27592 Genome accession: NC_021741 Putative virulence/resistance : Virulence Product : lysine decarboxylase CadA Function : - COG functional category : - COG ID : - EC number : 4.1.1.18 Position : 4102524 - 4104668 bp Length : 2145 bp Strand : - Note : constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAACATCATCGCGATCATGAGCCCAGCGGGCGTTTATTACAAAGACGAGCCGATCCGCGAGCTTCACACCGCACTGGC TGCGATGAACTTCCAACTGGTGTATCCCAAAAACAGCGGCGATTTGTTGAAGCTGATCGAAGCTAACGCACGCATTTGCG GCGTGATTTTCGACTGGGATGACTACAGCCTGGAATTGTGCAGCGAGATCAACGAGCTCAACGAGTATCTGCCGCTGTAT GCGTTTATCAACACGCATTCCACCTTTGACGTTAGCCTGCATGAAATGCGTATGGTGCTGTATTTCTTCGAGTACGGCCT GAATGCGGCAGATGATATTGCGCAGCGCATCCAGCAATATACCGCTGAATACATCGATACTATTACACCGCCGCTGACCA AGGCACTGTTCAATTACGTGCATGAAGGGAAATACACCTTCTGTACTCCCGGCCACATGGCCGGTACCGCCTTTCAGAAG AGCCCGGTCGGTTGCCTGTTTTACGATTTTTTCGGTGCCAATACTCTGAAAGCCGACGTGTCGATTTCGGTCACCGAGCT GGGCTCGCTGCTGGATCACACTGGCCCTCACCTGGAGGCCGAAGAGTATATTGCGCGCACCTTTAACGCCGAGCAAAGTT ATCTGGTGACCAACGGCACCTCTACCGCCAATAAAATTGTCGGCATGTATTCGGCACCGACTGGCAGCACGGTATTGATC GACCGCAACTGCCATAAGTCCCTGTGCCATCTGCTGATGATGAGCGATATCGTGCCGATTTATTTGCGCCCGCTGCGCAA TGCCTACGGGATTCTTGGCGGGATCCCACAGCGTGAATTCACCCATGACAGCATTGCCGCTCGGGTGGCTGACACGGCCA ACGCCAGTTGGCCAGTCCATGCGGTGATCACTAACTCGACCTACGATGGCCTGCTGTATAACACCGACTACATCAAGCAG ACGCTGGACGTCCCATCAATTCATTTTGATTCCGCCTGGGTGCCCTATACCAATTTCCATCCGATTTATGACGGCAAGAG CGGCATGAGCGGTGAACGTATACCCGGTAAAGTGATCTACGAAACCCAGTCGACCCATAAACTGCTGGCGGCGTTTTCAC AGGCCTCGATGATCCACATTAAGGGTGACTATGACGAAAGTACCTTTAACGAGGCCTATATGATGCACACCACCACTTCG CCGAATTACGGCATCGTGGCGTCGATGGAGACCGCGGCGGCGATGCTGCGTGGTAATCCGGGGCGACGGTTGATTAACCG CTCGGTGGAGCGTGCGCTGCATTTCCGTCGTGAGGTGCAGCGTTTGCGGGAAGAAAGCGATAGCTGGTTCTTCGATATCT GGCAGCCGGAAGAGATTGACGAGGCGCAGTGCTGGCCGCTAAACCCGGATGACAACTGGCACGGCTTTGGCAATACCGAC CGCGATCACATGTATCTCGATCCTATCAAGGTCACCATCCTGACGCCGGGGATGAATGAGCTTGGCGCGCTGGAAGAGAG CGGCATACCGGCAGCGCTGGTAGCGAAATACCTGGACGAACGCGGTATCGTGGTGGAGAAAACCGGCCCTTATAATCTGC TGTTCCTGTTCAGTATCGGCATTGATAAGACCAAGGCGATGAGCCTGCTGCGTGGCCTGACCGACTTTAAACGCGCCTAC GATCTCAATCTGCGAGTGAAGAACATGCTGCCGGACCTGTTTGCCGAGGATCCGGATTTCTACCGTAATATGCGTATTCA GGATCTGGCCGCCGGGATCCATAGCTTGATCTGTCGGCACGATCTGCCGGGTTTGATGCAGCGGGCTTTTGATGTGTTGC CAGAAATGAAGCTGACGCCACACCAAATGTTCCAGCAGCAGGTGCGTGGCAACGTGGAAACCTGCGAGTTGGATCAACTG GTCGGCAAAGTCGCGGCGAACATGATCCTGCCTTATCCGCCAGGGGTTCCGCTGGTGATGCCGGGGGAGATGATCACCGA AGAGAGCCGAGCAGTGCTCGATTTCTTGCTGATGTTGTGTTCTATCGGCGAGCGCTATCCGGGGTTTGAAACCGATATCC ACGGCGCGAAGCTGACCGAAGACGGGCGTTATCTGGTGAAAGTACTCAAAGCACCGCAGCCTTAA Protein sequence : MNIIAIMSPAGVYYKDEPIRELHTALAAMNFQLVYPKNSGDLLKLIEANARICGVIFDWDDYSLELCSEINELNEYLPLY AFINTHSTFDVSLHEMRMVLYFFEYGLNAADDIAQRIQQYTAEYIDTITPPLTKALFNYVHEGKYTFCTPGHMAGTAFQK SPVGCLFYDFFGANTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPTGSTVLI DRNCHKSLCHLLMMSDIVPIYLRPLRNAYGILGGIPQREFTHDSIAARVADTANASWPVHAVITNSTYDGLLYNTDYIKQ TLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGERIPGKVIYETQSTHKLLAAFSQASMIHIKGDYDESTFNEAYMMHTTTS PNYGIVASMETAAAMLRGNPGRRLINRSVERALHFRREVQRLREESDSWFFDIWQPEEIDEAQCWPLNPDDNWHGFGNTD RDHMYLDPIKVTILTPGMNELGALEESGIPAALVAKYLDERGIVVEKTGPYNLLFLFSIGIDKTKAMSLLRGLTDFKRAY DLNLRVKNMLPDLFAEDPDFYRNMRIQDLAAGIHSLICRHDLPGLMQRAFDVLPEMKLTPHQMFQQQVRGNVETCELDQL VGKVAANMILPYPPGVPLVMPGEMITEESRAVLDFLLMLCSIGERYPGFETDIHGAKLTEDGRYLVKVLKAPQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 75 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M495_19665 | YP_008231846.1 | lysine decarboxylase CadA | VFG1670 | Protein | 0.0 | 65 |
