Gene Information

Name : M495_17955 (M495_17955)
Accession : YP_008231513.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Resistance
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3751726 - 3752148 bp
Length : 423 bp
Strand : +
Note : transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGCAATTAATATGCAGATTTTTATTAATGACATGATTAAATGGATAGAAAACAATTTGGGTGCAGAGCTGGATATTGA
AACCATTGCCAAGAAATCCGGCTACAGCAGATTCCATATTCAGCGGCTTTTCAAATTGCATGCCGGACTGACCATTGCCC
AATATATCAGAATGCGACGAGTCACCGAGGCGGCTATCGCCCTGAGGTTCACCGACAGAAAAATCATGGATATCGCACTA
GACTATGGCTTTGACTCTCAGCAGGTTTTTACCCGAATATTCAAAAAACAGCTAAAGACCACGCCAGGCGAGCTGAGGAG
AAGCAAGCAATTAAACAATAAGCGGCTCTGCCATTCCTTATACATGCCGACGATGCCACAAAAAATACCGACAGGCCCAC
CTAACGCCCACAAGCATAGTTAG

Protein sequence : 
MAINMQIFINDMIKWIENNLGAELDIETIAKKSGYSRFHIQRLFKLHAGLTIAQYIRMRRVTEAAIALRFTDRKIMDIAL
DYGFDSQQVFTRIFKKQLKTTPGELRRSKQLNNKRLCHSLYMPTMPQKIPTGPPNAHKHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 2e-21 52
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 2e-21 52
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 7e-20 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_17955 YP_008231513.1 transcriptional regulator NC_010558.1.6276025. Protein 8e-22 52
M495_17955 YP_008231513.1 transcriptional regulator CP001138.1.gene612.p Protein 8e-22 46
M495_17955 YP_008231513.1 transcriptional regulator CP000034.1.gene4505. Protein 2e-20 46
M495_17955 YP_008231513.1 transcriptional regulator BAC0371 Protein 8e-21 46
M495_17955 YP_008231513.1 transcriptional regulator NC_002695.1.914293.p Protein 8e-21 46
M495_17955 YP_008231513.1 transcriptional regulator CP001918.1.gene327.p Protein 2e-19 45
M495_17955 YP_008231513.1 transcriptional regulator CP001138.1.gene4488. Protein 2e-20 44
M495_17955 YP_008231513.1 transcriptional regulator CP000647.1.gene4499. Protein 4e-19 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_17955 YP_008231513.1 transcriptional regulator VFG1038 Protein 7e-22 52
M495_17955 YP_008231513.1 transcriptional regulator VFG0585 Protein 2e-20 44