Gene Information

Name : M495_16080 (M495_16080)
Accession : YP_008231153.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3342567 - 3343274 bp
Length : 708 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCGATTACTGTTGGTTGAGGACGAAGAAAAAACCTCGTCCTACGTTAACCGCGCACTGAGCGAACTGGGCTACACCGT
AGACGTCGCCGGCGATGGCATTGAGGGCTTGCATCTGGCGGTGCAGCAGGACTATGACGCGGTGATCCTGGATGTGATGC
TGCCGGGCAAAGACGGCTATGCGGTATTGGAAGGCCTGCGCGCCAGCAAACAGACGCCGGTGTTGATGCTGTCTGCCCGC
GGTTCGGTAGACGAACGCGTCAAGGGCCTGCGCCACGGGGCGGATGATTATCTGCCCAAGCCGTTCTCGCTGATTGAACT
GGTCGCCCGCATCCAGGCGTTATTGCGCCGCCGCACCAGCGACGGCATTGACGTCACCCAACTGCAAATCGACGATCTGC
ACGTGGATCTGCTGGCGCGGCGAGTGACCCGCGGCGGGGAGCGTATCGATCTGACCGCCAAAGAATTTGCTCTGCTCAGC
CTGTTGGCGCGCCATCAGGGGGAGATACTGTCCAAAATGATGATCGCCGAACAGGTTTGGGACATGAACTTCGACAGCGA
CGCCAACGTGGTTGAAGTGGCGATTAAGCGACTGCGCGCCAAAATCGACTCCCCCTATCCGCAAAAGCTGCTGCACACGG
TGCGAGGCATGGGCTACGTGCTGGAAAATCGTCCGCTGCATCGCGATGCGCCACGGATAATCGCCTGA

Protein sequence : 
MRLLLVEDEEKTSSYVNRALSELGYTVDVAGDGIEGLHLAVQQDYDAVILDVMLPGKDGYAVLEGLRASKQTPVLMLSAR
GSVDERVKGLRHGADDYLPKPFSLIELVARIQALLRRRTSDGIDVTQLQIDDLHVDLLARRVTRGGERIDLTAKEFALLS
LLARHQGEILSKMMIAEQVWDMNFDSDANVVEVAIKRLRAKIDSPYPQKLLHTVRGMGYVLENRPLHRDAPRIIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-56 53
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-55 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_16080 YP_008231153.1 transcriptional regulator BAC0083 Protein 4e-62 61
M495_16080 YP_008231153.1 transcriptional regulator BAC0197 Protein 4e-62 58
M495_16080 YP_008231153.1 transcriptional regulator BAC0638 Protein 1e-53 57
M495_16080 YP_008231153.1 transcriptional regulator BAC0125 Protein 8e-63 56
M495_16080 YP_008231153.1 transcriptional regulator BAC0111 Protein 6e-62 55
M495_16080 YP_008231153.1 transcriptional regulator BAC0347 Protein 1e-54 52
M495_16080 YP_008231153.1 transcriptional regulator BAC0308 Protein 2e-53 51
M495_16080 YP_008231153.1 transcriptional regulator HE999704.1.gene1528. Protein 7e-33 42
M495_16080 YP_008231153.1 transcriptional regulator BAC0487 Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_16080 YP_008231153.1 transcriptional regulator VFG0596 Protein 2e-56 53
M495_16080 YP_008231153.1 transcriptional regulator VFG1389 Protein 2e-39 47
M495_16080 YP_008231153.1 transcriptional regulator VFG1390 Protein 8e-42 45
M495_16080 YP_008231153.1 transcriptional regulator VFG1386 Protein 6e-36 41