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Name : gabD (M495_15785) Accession : YP_008231096.1 Strain : Serratia liquefaciens ATCC 27592 Genome accession: NC_021741 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehdyrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 3274007 - 3275482 bp Length : 1476 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAGCACTAACTTCTCCGCCCGCCTGAAAGATCCCACGCTGTTCCGCGAAGCCAACTACATCGATGGACAGTGGTTGGC GGCCAAAGGCGACCAAACTATCAAGATCCACAACCCCGCCACCGGCGAGCTGGTCGGTCAGGTGCCGGCTTTGGGTGCCA AAGAAACCGCGCAGGCGATCGCCGCCGCCAAAAAAGCCCAGCCTGGTTGGCGCGCGCTGACGGCCAAAGAGCGTGCCGGC AAGCTGCGCAAACTGTTCGAACTGATGATGGAAAACCAGGAGGATCTGGCCATTATCATGACCGCCGAGCAAGGCAAGCC GTTGGCAGAAAGCCGGGGTGAAATTGCCTACGCCGCCTCCTTCATCGAGTGGTTCGCCGAAGAAGGCAAGCGGGTTTACG GCGACACCATCCCGCAGAATCTGTCCGGTCGCCGCATTATCGTGCAGAAAGAGCCGATTGGCGTTTTCGCCGCCATTACG CCGTGGAATTTCCCGGCGGCAATGATCACCCGCAAGGCCGGTCCCGGCTGGGCGGCGGGCTGTACCGGGGTGATCCGTCC CGCCAGTCAGACCCCCTTCTCGGCGTTGGCGCTCGCCGTGCTGGCCGAACGTGCAGGTTTACCGGCCGGCGTGTGCAATG TGATCACCGGCCCAAGCCAGGCTATCGGTGGCGAACTGACCGCCAACCCGGACGTGCGCAAACTCTCCTTTACCGGCAGC ACCGAAGTGGGTGCGCAACTGCTGGCGCAGTGTGCCCCGACCATCAAAAAAACCAGTATGGAACTGGGCGGCAATGCGCC GTTTATCGTGTTTGACGATGCCGATCTGGACGCCGCCGTCGCCGGTGCCGTCGCGTCCAAGTATCGCAACGCTGGCCAGA CCTGCGTTTGCACCAACCGCTTCCTGGTACAGGACGGCATTTACGACGCCTTTGCCGAAAAGCTGAAGGTGGCAGTGGCC AAGCTGAAAGTCGGTAATGGCATGGATGATGGCGTCACCATCGGCCCGTTGATTAATCCGGCCGCCGTGGAAAAAGTCAG CGAGCATATCGCCGACGCGGTGCAGCACGGCGCCTCGATACTGCTGGGCGGCAAGCCCCATGAGCTGGGCAATAACTTCT TTACGCCGACCATTCTGACCAACGTGCCGCGGCAGGCCAAAATCTTCCATGAAGAAACCTTTGGCCCGGTAGCGCCGCTG ATCCGCTTCGACAGCGAAGCCGAAGCCATTGAGTTGGCCAACGATACCCCTTTCGGTCTGGCTTCTTATTTCTACAGTCG CGACATTGGCCGGGTAATGCGGGTTGCCGAAGCGCTGGAATACGGCATCGTAGGCATCAATGAAGGGCTGATTTCCACCG AAGTGGCCCCCTTCGGCGGGGTTAAAAACTCCGGACTGGGGCGTGAAGGATCGAAGTACGGTATCGAAGATTATCTCGAG ATAAAGTACCTGTGCCTGGGCGGATTAGGGATCTAG Protein sequence : MSTNFSARLKDPTLFREANYIDGQWLAAKGDQTIKIHNPATGELVGQVPALGAKETAQAIAAAKKAQPGWRALTAKERAG KLRKLFELMMENQEDLAIIMTAEQGKPLAESRGEIAYAASFIEWFAEEGKRVYGDTIPQNLSGRRIIVQKEPIGVFAAIT PWNFPAAMITRKAGPGWAAGCTGVIRPASQTPFSALALAVLAERAGLPAGVCNVITGPSQAIGGELTANPDVRKLSFTGS TEVGAQLLAQCAPTIKKTSMELGGNAPFIVFDDADLDAAVAGAVASKYRNAGQTCVCTNRFLVQDGIYDAFAEKLKVAVA KLKVGNGMDDGVTIGPLINPAAVEKVSEHIADAVQHGASILLGGKPHELGNNFFTPTILTNVPRQAKIFHEETFGPVAPL IRFDSEAEAIELANDTPFGLASYFYSRDIGRVMRVAEALEYGIVGINEGLISTEVAPFGGVKNSGLGREGSKYGIEDYLE IKYLCLGGLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-138 | 66 |
