|
Name : fliP (M495_15215) Accession : YP_008230983.1 Strain : Serratia liquefaciens ATCC 27592 Genome accession: NC_021741 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : - COG ID : - EC number : - Position : 3166270 - 3167046 bp Length : 777 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAAATCCCTCGTTCAGTGTGTCGCCTTCTGTGGGCGAGGCAAAATACTTCTGCGCGTATTGGCAACGGCTTTACTGTT GCTCAGCCCCACCGCCTTCGCACAACTTCCCGGTCTGATCAGCCAGCCATTAGCCAACGGCGGCCAAAGCTGGTCGCTGC CGGTGCAAACCTTGGTGTTGCTGACCTCGCTCAGTTTCTTGCCGGCCATGCTGCTGATGATGACCAGCTTCACGCGCATC ATCATCGTCCTGGGGTTGCTGCGCAATGCCCTCGGCACCCCCTCGGCCCCACCCAACCAGGTGATGCTGGGCCTGGCGCT GTTCCTGACCTTTTTCATTATGTCGCCGGTGTTCGACAAGGTTTATCAAGACGCTTATCTGCCGTTCAGCCAGGACAAAA TCAGCCTGGACATCGCGCTGGATAAAGGTTCACAGCCGCTGCGCGAGTTTATGCTGCGCCAAACGCGTGAAACCGATCTG GCGCTGTATGCCAAGCTCGCCAACCAGCCGCCGCTGGCCGGGCCGGAAGCGGTGCCGATGCGCATCCTCCTGCCGGCCTA CGTCACCAGCGAACTGAAAACCGCGTTCCAAATCGGCTTCACGGTGTTTATTCCGTTCCTGATTATCGATCTGGTGGTCG CCAGCGTGTTGATGGCGCTGGGGATGATGATGGTGCCACCGGCAACCATCTCGTTGCCCTTCAAGCTGATGCTGTTTGTT CTGGTGGACGGCTGGCAACTGCTGCTGGGCTCGCTGGCGCAAAGTTTCTATTCGTAA Protein sequence : MKSLVQCVAFCGRGKILLRVLATALLLLSPTAFAQLPGLISQPLANGGQSWSLPVQTLVLLTSLSFLPAMLLMMTSFTRI IIVLGLLRNALGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQDAYLPFSQDKISLDIALDKGSQPLREFMLRQTRETDL ALYAKLANQPPLAGPEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFV LVDGWQLLLGSLAQSFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 2e-27 | 44 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 2e-26 | 44 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 2e-26 | 44 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 2e-26 | 44 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-20 | 43 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 2e-20 | 43 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 2e-21 | 43 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 3e-21 | 43 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 5e-30 | 42 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 7e-30 | 42 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 8e-29 | 42 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 8e-29 | 42 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 5e-29 | 41 |
| escR | AAC38369.1 | EscR | Virulence | LEE | Protein | 1e-29 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 3e-30 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 2e-30 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-30 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 2e-30 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 3e-30 | 41 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 2e-30 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 3e-30 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 2e-30 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 2e-30 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 2e-30 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 2e-96 | 93 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 9e-75 | 71 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 3e-62 | 60 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 3e-61 | 56 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 9e-32 | 43 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 3e-30 | 42 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 7e-31 | 41 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG0715 | Protein | 8e-30 | 41 |
| fliP | YP_008230983.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 1e-30 | 41 |
