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Name : pspF (M495_13095) Accession : YP_008230561.1 Strain : Serratia liquefaciens ATCC 27592 Genome accession: NC_021741 Putative virulence/resistance : Virulence Product : transcriptional regulator Function : - COG functional category : - COG ID : - EC number : - Position : 2759535 - 2760542 bp Length : 1008 bp Strand : + Note : transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAGCGAACAGTTAGAAAACCTGCTGGGCGAAGCAAACGCCTTTGTCGAAGTATTGGAGCAAGTCTCGCAACTGGCAAA GTTGAACAAGCCGGTGTTGGTTATTGGTGAGCGCGGAACCGGTAAGGAGTTGATTGCCCACCGTTTACATTACCTCTCCA ACCGTTGGCAAGGGCCATTTATCTCGCTTAACTGCGCGGCCCTGAATGAGAACCTGCTGGATTCGGAACTGTTCGGCCAC GAGGCCGGAGCTTTTACCGGTGCGCAGAAGCGCCACCTGGGTCGCTTTGAACGTGCCGACGGCGGCACTTTGTTTCTCGA TGAACTGGCGACCGCACCGATGCTGGTACAGGAAAAATTGCTGCGGGTGATTGAATACGGCCATCTGGAACGCGTCGGCG GTAGCCAACCGCTGCAGGTCGATGTCCGGCTGGTGTGTGCCACCAACGACGACTTGCCCGCGCTGGCGGCGGCAGGAAAA TTCCGCGCCGACCTGCTGGACCGCCTGGCGTTCGACGTGGTGCAGTTGCCGCCGCTGCGCCGGCGCCAGCAAGACATCAT GTTGCTGGCCGAACACTTTGCGATCCAGATGTGTCGTGAGCTGTCGTTGCCGCTGTTTCCTGGCTTTACCGAGCGTGCCA GAGATACCCTGCTCGGCTATCACTGGCCAGGCAACGTACGCGAATTGAAAAACGTGGTGGAGCGTTCGGTCTACCGCCAC GGCACCAGCGCGGAAGCGCTGGATAACATCGTCATCAACCCGTTCGCCCAGCGGGAAAGTGTGCCATTGCCTGTAGAGGC CGAAGCGCATGATGGCCTGCCGGTACTGCCGCTGGATTTAAAAGCCTGGCAATTGGCGCAGGAGAAGTCTCTGATCGAAG CGGCACTGCAACAGGGAAGGTTTAACCAACGTAAAGCGGCGGAGTTGCTGGGGCTGACCTATCACCAGCTACGCGGCATG CTGAAAAAACATGCGTTACTGCAAAATGGCGAGGCGGACGACGAATAG Protein sequence : MSEQLENLLGEANAFVEVLEQVSQLAKLNKPVLVIGERGTGKELIAHRLHYLSNRWQGPFISLNCAALNENLLDSELFGH EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGHLERVGGSQPLQVDVRLVCATNDDLPALAAAGK FRADLLDRLAFDVVQLPPLRRRQQDIMLLAEHFAIQMCRELSLPLFPGFTERARDTLLGYHWPGNVRELKNVVERSVYRH GTSAEALDNIVINPFAQRESVPLPVEAEAHDGLPVLPLDLKAWQLAQEKSLIEAALQQGRFNQRKAAELLGLTYHQLRGM LKKHALLQNGEADDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 7e-35 | 41 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 1e-34 | 41 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 9e-34 | 41 |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 9e-34 | 41 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 1e-33 | 41 |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 9e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pspF | YP_008230561.1 | transcriptional regulator | VFG1214 | Protein | 2e-45 | 41 |
