Gene Information

Name : M495_12965 (M495_12965)
Accession : YP_008230535.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Resistance
Product : multidrug DMT transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2729323 - 2729655 bp
Length : 333 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGCGGATTTATGTATTTAACCATGGCGGTAGTCGCAGAAGTGATCGCCACTACCATGCTGAAAGCCTCTGAGGGATT
CACTCGCTTGTGGCCGTCGCTGGTGGTCGTGGTCGGCTATGGCGTAGCTTTCTGGGGGCTGTCGATGGTGGTGAAAACCA
TGCCGCTGGGCATTGTTTACGCCATCTGGTCGGGCATGGGTATTGTTCTGGTGTCAATTGCCGCGGTATTTGTTTATCAA
CAAAAGCTGGATTGGCCAGCCGTACTGGGGATGGGATTAATTATTGCTGGCGTGTTGGTGATTAATTTACTGTCGAAAAC
CGCAGCACACTGA

Protein sequence :
MSGFMYLTMAVVAEVIATTMLKASEGFTRLWPSLVVVVGYGVAFWGLSMVVKTMPLGIVYAIWSGMGIVLVSIAAVFVYQ
QKLDWPAVLGMGLIIAGVLVINLLSKTAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-17 53
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 4e-17 53
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 4e-17 53
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 4e-17 53
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 4e-17 53
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 4e-17 53
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 4e-17 53
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 5e-17 53
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 4e-17 53
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-17 53
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 5e-17 53
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 4e-17 53
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 5e-17 53
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-17 53
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 5e-17 53
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-17 53
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 5e-17 53
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 4e-17 53
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 4e-17 53
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 4e-17 53
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 5e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0377 Protein 9e-43 90
M495_12965 YP_008230535.1 multidrug DMT transporter CP004022.1.gene1549. Protein 2e-35 73
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0324 Protein 5e-20 56
M495_12965 YP_008230535.1 multidrug DMT transporter CP001138.1.gene1489. Protein 1e-21 56
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0322 Protein 7e-22 55
M495_12965 YP_008230535.1 multidrug DMT transporter NC_002695.1.913273.p Protein 8e-23 55
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0150 Protein 1e-22 53
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0002 Protein 1e-21 53
M495_12965 YP_008230535.1 multidrug DMT transporter NC_010410.6003348.p0 Protein 1e-21 53
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0323 Protein 2e-17 53
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0140 Protein 1e-16 45
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0192 Protein 8e-15 44
M495_12965 YP_008230535.1 multidrug DMT transporter BAC0325 Protein 7e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_12965 YP_008230535.1 multidrug DMT transporter VFG1586 Protein 2e-19 41