Gene Information

Name : M495_12465 (M495_12465)
Accession : YP_008230436.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : lysine 6-monooxygenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2620248 - 2621573 bp
Length : 1326 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAACCAGCGTTTGGACTTTATCGGTATTGGCATCGGTCCGTCCAACCTAAGTATTGCTGCGCTTGGTAGCGAGATCGA
AGGGTTTAATTGCAAATTCCTCGAGCGCAAACCGCACTTTTCTTGGCATCCGGGCATGATCCTGGCAGATAGCAGTATGC
AGACCCACTTTTTGAAGGATCTGGTGACGGCGGTTTCACCCACCAATCCTTACAGTTTTCTCAACTATCTGGTGAAGCGG
AAAAAGTTCTACCGTTTTCTGACCAGCGAACAGCGTACCGCCTCTCGTGAAGAGTTTGCCGATTATCTCAACTGGGCTGC
AACGGGGTTGGACTCACTGGTGTTCAACCAAGAGGTTCAGCGGGTGGAGTTTGATGACCGTCAGCGACAGTTTGTCGTTA
CCACTCAAAACGACGTATTTTACGCCAAACACCTTTGTGTAGGCATCGGCAAACAAATTAAGCTGCCAGACTGTGTGACT
CAGCAAAATGATCAATGCTTCCACGCCAGCGAAATGATGTTACGCCAGCCTAACCTGACCGGAAAACGTGTGGCGATCGT
GGGTGGGGGGCAAAGCGGGGCCGATCTGTTCCTGAATATTTTTCAGGGGCAATGGGGCCAACCAGAACAGCTGAGTTGGA
TTTCCCGCCGCAATAACTACAACGCGCTTGATGAAGCGGCATTTGCCAACGAGTATTTTACGCCAGAATATGTCGAGAAA
TTCTGCACGCTAAACAACTCAGCCAAGCAACACATGTTGCATGAGCAAAAGATGACATCTGATGGCATCACCAGCGAGTC
TCTGTTAGCTATCTATCGTGCCATGTATCACCGCTTCGATGTACTTCGCGAGAAACGATGGGTGAAACTGTTGCCCAGCC
GTTCAGTGACCGCCCTTACAGCCAAAGATAATTTCTATCGGTTAGAGACGCAGCATCACCTTGATCAAGGCTACGAAATC
GTTGATGCAGACGTGGTGATTTTTGCTACCGGTTACCAACAGGTGCGCCCGGCGTTTCTTGAATCTCTGGCTCATGGTCT
ATCAACCACCGCCGATGGGCAATACCGTATTGCCTCTGATTTCACCTTTGAGCGCGAAGGTGAAGCTGAGAACTGCTTGT
TTGCCGTTAACGCCAGCATGCACCACCACGGTATTGCCGATCCTCAACTCAGTCTGATGGCCTGGCGTTCGGCCCGGATC
CTCAATCGCGCATTAGGCCATGACCAATTTGATCTGAGCACGCCCCCAGCGATGATCCAATGGCGCAGTGAGCAGCAACA
ACCTATAGCTTCAGCTTCCTTTGGTGCCATTCAGTCACCGTTTTAA

Protein sequence :
MNQRLDFIGIGIGPSNLSIAALGSEIEGFNCKFLERKPHFSWHPGMILADSSMQTHFLKDLVTAVSPTNPYSFLNYLVKR
KKFYRFLTSEQRTASREEFADYLNWAATGLDSLVFNQEVQRVEFDDRQRQFVVTTQNDVFYAKHLCVGIGKQIKLPDCVT
QQNDQCFHASEMMLRQPNLTGKRVAIVGGGQSGADLFLNIFQGQWGQPEQLSWISRRNNYNALDEAAFANEYFTPEYVEK
FCTLNNSAKQHMLHEQKMTSDGITSESLLAIYRAMYHRFDVLREKRWVKLLPSRSVTALTAKDNFYRLETQHHLDQGYEI
VDADVVIFATGYQQVRPAFLESLAHGLSTTADGQYRIASDFTFEREGEAENCLFAVNASMHHHGIADPQLSLMAWRSARI
LNRALGHDQFDLSTPPAMIQWRSEQQQPIASASFGAIQSPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD AAD44749.1 IucD Virulence SHI-2 Protein 7e-134 60
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 9e-134 60
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 9e-134 60
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 1e-133 59
iucD AAK71634.1 IucD Virulence SHI-3 Protein 3e-132 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_12465 YP_008230436.1 lysine 6-monooxygenase VFG0618 Protein 4e-134 60
M495_12465 YP_008230436.1 lysine 6-monooxygenase VFG0937 Protein 5e-134 59
M495_12465 YP_008230436.1 lysine 6-monooxygenase VFG1084 Protein 2e-132 59