Gene Information

Name : M495_11930 (M495_11930)
Accession : YP_008230329.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2495771 - 2497291 bp
Length : 1521 bp
Strand : -
Note : catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAAATACGTTCATCCTGGTTTGCCTGGTTCGTTGGTCTCTTTCAAACAGCGCTACGGCAACTACATTGGCGGCAAATT
TGTCGAACCCGTTTCAGGCAACTACTTCACCGACACCTCCCCGATGACAGGTCAGACTGTCGCCGAATTCCCGCGCTCCG
ACGCGAAAGATATCGAACAAGCGCTGGATGCGGCGCATGCCGCAGCCGAAACCTGGGGGAAAGCCAGCGTTCAGGAAAGG
TCTAATGTGCTGCTGGCGATCGCCGATCGTATGGAGTCAAAGCTCGAATTGCTGGCACTGACCGAAAGCTGGGACAACGG
CAAACCGATCCGCGAAACGCTGAACGCGGACATTCCGCTGGCGATCGACCACTTCCGCTATTTCGCCGGCTGTTTGCGTG
CACAGGAAGGCACCGCCGCTGAGATCGATCAAAACACCGTGGCCTACCATATCTATGAGCCTCTGGGCGTGGTTGGGCAG
ATTATTCCCTGGAACTTCCCGCTGTTGATGGCCGCATGGAAACTAGCCCCGGCGCTGGCCGCCGGCAACTGCGTGGTGCT
TAAACCGGCGGAGCAAACCCCGCTCAGCATCTGCGTGCTGCTGGAAATGATTGGTGACTTGCTGCCGCCGGGCGTGCTCA
ATGTGGTTCACGGTTTCGGTAAAGAAGCCGGTGAGGCATTGGCAACCAGCAAGCGTATCGACAAAATCGCCTTTACCGGT
TCAACCCCGGTAGGCCGCCATATTCTGGCCTGCGCGGCGGAAAATATCATTCCCAGCACCGTGGAGCTGGGCGGTAAATC
GCCTAACATCTTCTTTGAAGACATCATGCAGGCGGAACCCGAATTCATCGACAAGGCGGTTGAGGGGCTGATTCTTGGCT
TCTTCAACCAGGGTGAAGTCTGTACCTGCCCTTCGCGCGCCCTGATTCAGGAATCGATTTACCCGCAATTTATGGAAAAA
GTGCTGGCGCGCATCACCACCATTCGCCAGGGTGACCCCTTTGACACCGACACCATGATCGGTGCTCAGGCGTCTCAGCA
GCAGTTCGACAAGATCCTGTCTTACATCGAGATCGCTAAAAACGAAGGCGGAAAAATCATTGCCGGCGGCGAGCGCGCCA
GCCATGAGCAAACTTTGCAAAGCGGTTTTTATCTGCAGCCCACCTTAATCACCGGCAATAACAGCATGCGTTTCTTCCGT
GAAGAGATCTTCGGACCGGTGATCGGCGTGACCACCTTCAAAGACGAAGCCGAAGCACTGGCATTGGCCAACGACAGTGA
GTTCGGGCTGGGTGCCGGTTTGTGGACCCGCGACGTAAATCGCGCCTATCGCATGGGGCGCGCCATCAAGGCCGGACGCG
TGTGGACCAACTGTTATCACCTGTATCCGGCGCATGCTGCCTTCGGCGGTTACAAAAACTCCGGCGTCGGCCGCGAGACC
CACAAGGTAGCGCTGTCGCATTACCAGCAGGTCAAAAACCTGTTGGTCAGTTACGACAGTAAGCCGCTCGGGCTGTTTTG
A

Protein sequence :
MKYVHPGLPGSLVSFKQRYGNYIGGKFVEPVSGNYFTDTSPMTGQTVAEFPRSDAKDIEQALDAAHAAAETWGKASVQER
SNVLLAIADRMESKLELLALTESWDNGKPIRETLNADIPLAIDHFRYFAGCLRAQEGTAAEIDQNTVAYHIYEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSICVLLEMIGDLLPPGVLNVVHGFGKEAGEALATSKRIDKIAFTG
STPVGRHILACAAENIIPSTVELGGKSPNIFFEDIMQAEPEFIDKAVEGLILGFFNQGEVCTCPSRALIQESIYPQFMEK
VLARITTIRQGDPFDTDTMIGAQASQQQFDKILSYIEIAKNEGGKIIAGGERASHEQTLQSGFYLQPTLITGNNSMRFFR
EEIFGPVIGVTTFKDEAEALALANDSEFGLGAGLWTRDVNRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKNSGVGRET
HKVALSHYQQVKNLLVSYDSKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-150 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-156 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-156 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-156 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-155 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-57 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_11930 YP_008230329.1 aldehyde dehydrogenase VFG0082 Protein 2e-150 66