Gene Information

Name : M495_10365 (M495_10365)
Accession : YP_008230019.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : periplasmic chelated iron-binding protein yfeA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2181424 - 2182368 bp
Length : 945 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGTTTTTGAAACAACGCGCTTTTCCCCGCCTATCCCTCGTTAAGAACAGGGCCTACTTCCGCCCTTTCACCCTGCTGTG
TCTGTTGTTGACCGCCAGCCTTGCCAGCCATGCCGCGTTGGCGGAAAAGAAGCTGCGCGTGGTGACCACTTTCACCATTA
TTCAGGACATTGCCCAGAACGTAGCCGGTGACGCCGCCGTAGTGGAGTCGATCACCAAACCGGGTGCAGAGATCCATGAT
TACCAGCCTACACCACGCGACATCGTCAAAGCGCAGCACGCCGACCTGATCCTGTGGAACGGCATGAATCTGGAACGCTG
GTTCCAACGCTTCTTCGAGAACATTAAACAGGTGCCTGCGGCCGTGGTCACCGAGGGCATCACCCCGCTGCCGATCCGCG
AAGGGCCTTATAACGGCAACCCGAATCCACATGCCTGGATGTCTGCCAGCAATGCGCAGGTGTACATCGAAAATATCCGC
AAAGCGCTGGTGCAGTACGACCCGGCCAATGCAGAAACTTACAATCGCAATGCTAAAACCTACGCTGCCAAAATTGCCGC
GCTGGATGCCCCGCTGCGCGAACGCCTGTCTCGCATTCCGGAAGCCCAGCGTTGGCTGGTGACCAGCGAGGGCGCCTTCA
GCTATCTGGCCAAAGACTATCAGTTGAAAGAAGTTTATCTGTGGCCGATCAACGCCGATGAACAAGGTTCACCGCAGCAG
GTTCGCCGGGTGATTGACGCCGTGCGTGCCAACCACATCCCGGTGGTGTTCAGCGAAAGCACTATTTCAGACAAACCGGC
CAAGCAGGTCGCGAAAGAAACCGGCGCAAAATACGGCGGCGTGCTCTATGTCGACTCTCTGTCCACCCAGGATGGCCCGG
TACCGACCTATATCGACCTGCTCAACGTCACCGTACAAACCATTGCCAAAGGATTTGATCAATGA

Protein sequence : 
MFLKQRAFPRLSLVKNRAYFRPFTLLCLLLTASLASHAALAEKKLRVVTTFTIIQDIAQNVAGDAAVVESITKPGAEIHD
YQPTPRDIVKAQHADLILWNGMNLERWFQRFFENIKQVPAAVVTEGITPLPIREGPYNGNPNPHAWMSASNAQVYIENIR
KALVQYDPANAETYNRNAKTYAAKIAALDAPLRERLSRIPEAQRWLVTSEGAFSYLAKDYQLKEVYLWPINADEQGSPQQ
VRRVIDAVRANHIPVVFSESTISDKPAKQVAKETGAKYGGVLYVDSLSTQDGPVPTYIDLLNVTVQTIAKGFDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-91 67
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-91 67
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-91 67
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-91 67
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-91 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_10365 YP_008230019.1 periplasmic chelated iron-binding protein yfeA BAC0439 Protein 4e-109 83
M495_10365 YP_008230019.1 periplasmic chelated iron-binding protein yfeA BAC0349 Protein 1e-91 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_10365 YP_008230019.1 periplasmic chelated iron-binding protein yfeA VFG0525 Protein 1e-91 67