Gene Information

Name : M495_10360 (M495_10360)
Accession : YP_008230018.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : iron ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2180537 - 2181427 bp
Length : 891 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGACAAGTGAGGTTTTTGTCCGCCCTGAGTTGAGCGTGGACGACGTTACCGTGACCTACAACAACGGCCATACCGCGAT
CCACAACGCCAGCTTTACCCTGAGCGGCGGTGCCATCTGCGCGCTGGTTGGCGTCAACGGCAGCGGTAAATCGACCTTGT
TCAAAAGCATTATGGGCCTGGTGCGGCCCACCACGGGCCGCGTACAGCTCAACGAGCAGCCAGTCGCGCAGGCATTGAAG
AAAAACGTTATTGCTTACGTGCCGCAAACCGAGGACGTTGACTGGAATTTCCCAGTGCTGGTGGAAGATGTCGTCATGAT
GGGCCGTTACGGCAAGATGAACTTCCTGCGTATTCCTTCAAAAGAGGACCGGCTGCGAGTGGACAAGGCGCTGGAGCGCG
TTGGGCTGAGTGAGTTACGCACCCGCCAGATCGGCGAGCTTTCCGGCGGGCAGAAAAAACGCGTCTTTCTGGCGCGGGCG
CTGGCGCAACAAGGTAGCGTTCTGCTGCTGGACGAGCCTTTCACCGGGGTCGACGTCAAAACCGAGAACGCCATTATCGA
TCTGCTGCGCGCACTGCGTGATGAAGGCCACCTGATCCTGGTTTCAACCCATAACTTGGGGAGCGTGCCGGAATTTTGCG
ATCGGGTGATCCTGATTAACCGCACGGTGCTGGCTGCCGGCCCAACAGAAACCACCTTTACCCAAAGCAACCTGGAACAG
GCGTTTGGCGGCGTACTGCGCCATATCAATCTGTCAGGCCCGGATCTGCACGACGACAACGATCCACGCACGGTCACGGT
ATTGACCGATGACGAGCGGCCAGCGGTGTTCTACGGCCATACCAAGAGCGATCCGCCGGCGCAAAGCCAGCCGAAGGAGA
AACAACCCTGA

Protein sequence : 
MTSEVFVRPELSVDDVTVTYNNGHTAIHNASFTLSGGAICALVGVNGSGKSTLFKSIMGLVRPTTGRVQLNEQPVAQALK
KNVIAYVPQTEDVDWNFPVLVEDVVMMGRYGKMNFLRIPSKEDRLRVDKALERVGLSELRTRQIGELSGGQKKRVFLARA
LAQQGSVLLLDEPFTGVDVKTENAIIDLLRALRDEGHLILVSTHNLGSVPEFCDRVILINRTVLAAGPTETTFTQSNLEQ
AFGGVLRHINLSGPDLHDDNDPRTVTVLTDDERPAVFYGHTKSDPPAQSQPKEKQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-83 67
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-83 67
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-84 67
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-84 67
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-83 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_10360 YP_008230018.1 iron ABC transporter permease BAC0440 Protein 5e-124 83
M495_10360 YP_008230018.1 iron ABC transporter permease BAC0350 Protein 4e-84 67
M495_10360 YP_008230018.1 iron ABC transporter permease BAC0400 Protein 1e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_10360 YP_008230018.1 iron ABC transporter permease VFG0526 Protein 4e-84 67