Gene Information

Name : M495_10355 (M495_10355)
Accession : YP_008230017.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2179677 - 2180537 bp
Length : 861 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCTGGAACTTCTGCTGCAACCCTTCAGTTACAACTACATGGTCAAAGCCATTTGGGTCAGCGCCATCGTCGGCGCCGC
CTGCGCGTTCCTTTCGGCCTACCTGATGCTAAAGGGCTGGTCGCTGATGGGGGACGCACTGTCGCACTCGGTGGTACCCG
GCGTTGCCGGGGCCTATGCGCTAGGCCTGCCCTACGCCGCCGGAGCCTTCTTCACCGGCATGCTGGCCGCGCTGGCAATG
ACGCTGGTGCGCCACGTGACTCGCCTGCGCGAAGACGCCATTATCGGCTTTATCTTTTCCACCTTCTTCGCCGTAGGCCT
GTTGATTGTGTCGCTAAACCCGACGTCGGTTAACGTCCAGTCGATTATCTTCGGCAATATCCTCGGTATCGCCGATGAAG
ACGTATTGCAGGTCGAGATTATCATCAGCGTTTCTCTACTGATCTTGTGTCTGGTGTGGAAAGACTTACTGGCAGTGTTT
TTTGACGAAAACCACGCCGTGTCTATCGGCCTGTCGCCGCTGCGGTTAAAGATCCTGTTCTTCACCCTGCTCAGCGCCTG
CACCGTAGCGGCATTGCAAACCGTTGGCGCCATTTTGGTGATCGCCATGGTGATCACGCCGGGGGCTACCGCCTACCTGC
TGACAGACCGCTTCAGCCGGTTGGTGATTATCGCCATCGTGATTGGCGCACTGACCAGCGGCCTGGGCGCTTACCTCAGC
TTCTTCCTCGACGGGGCTACCGGCGGGGTGATCGTGACTCTGCAAACGCTGGTATTCCTGGCCGCCTTTTTCTTCGCCCC
CAAACATGGGCTACTGGCGTCCAAACGCCGCGTGGCACGTGAACAGACCGGAGGCCACTGA

Protein sequence : 
MLELLLQPFSYNYMVKAIWVSAIVGAACAFLSAYLMLKGWSLMGDALSHSVVPGVAGAYALGLPYAAGAFFTGMLAALAM
TLVRHVTRLREDAIIGFIFSTFFAVGLLIVSLNPTSVNVQSIIFGNILGIADEDVLQVEIIISVSLLILCLVWKDLLAVF
FDENHAVSIGLSPLRLKILFFTLLSACTVAALQTVGAILVIAMVITPGATAYLLTDRFSRLVIIAIVIGALTSGLGAYLS
FFLDGATGGVIVTLQTLVFLAAFFFAPKHGLLASKRRVAREQTGGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-72 67
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-72 67
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-72 67
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-72 67
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-72 67
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 6e-38 43
sitD NP_461785.1 permease Virulence SPI-1 Protein 8e-38 43
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-37 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-37 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_10355 YP_008230017.1 membrane protein BAC0441 Protein 2e-94 90
M495_10355 YP_008230017.1 membrane protein BAC0351 Protein 6e-73 67
M495_10355 YP_008230017.1 membrane protein BAC0352 Protein 4e-38 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_10355 YP_008230017.1 membrane protein VFG0527 Protein 6e-73 67
M495_10355 YP_008230017.1 membrane protein VFG0528 Protein 4e-38 43