Gene Information

Name : M495_09320 (M495_09320)
Accession : YP_008229812.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1970145 - 1970501 bp
Length : 357 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAATAGCACGGGCTTTATTACTGATTTGATTGAGTGGATTGACAACAATCTGGAAGAGAAGCTGGATATCAACACCGT
GGCGGGGCGCGCGGGGTATTCCAAATGGCACCTGCAGCGTATGTTCAAACGCCAGACCGGCTACGCGCTGGGGGAGTATA
TCCGTATGCAGAAGCTGAGGCTTTCAGCCGAGCGCCTGGCCAACAGCGGCGAGCCGATCGTCAGCGTGGCGATCTCACTC
GGTTTCGATTCGCAACAGTCCTTCAATCGCAGTTTTAAACGCCATTACGGCCAAACCCCGGGTGACTGGCGCCGAGGTGG
AATGCAGCCGCACATGATGGCCAACCGACCGCACTGA

Protein sequence :
MNSTGFITDLIEWIDNNLEEKLDINTVAGRAGYSKWHLQRMFKRQTGYALGEYIRMQKLRLSAERLANSGEPIVSVAISL
GFDSQQSFNRSFKRHYGQTPGDWRRGGMQPHMMANRPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-22 47
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-17 42
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 5e-23 47
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP000647.1.gene1624. Protein 2e-22 47
M495_09320 YP_008229812.1 AraC family transcriptional regulator BAC0560 Protein 1e-23 47
M495_09320 YP_008229812.1 AraC family transcriptional regulator NC_002695.1.917339.p Protein 1e-23 47
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP000034.1.gene1596. Protein 1e-23 47
M495_09320 YP_008229812.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 3e-23 46
M495_09320 YP_008229812.1 AraC family transcriptional regulator BAC0371 Protein 3e-23 46
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 5e-23 46
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 4e-23 46
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 7e-23 46
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 3e-23 46
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 6e-23 45
M495_09320 YP_008229812.1 AraC family transcriptional regulator CP001138.1.gene612.p Protein 8e-21 44
M495_09320 YP_008229812.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 5e-18 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_09320 YP_008229812.1 AraC family transcriptional regulator VFG0585 Protein 4e-23 47
M495_09320 YP_008229812.1 AraC family transcriptional regulator VFG1038 Protein 5e-18 42