Gene Information

Name : ssuB (M495_08195)
Accession : YP_008229594.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Unknown
Product : aliphatic sulfonate ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1760826 - 1761602 bp
Length : 777 bp
Strand : -
Note : part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method:

DNA sequence :
ATGACGACTCCCGCTCGAATTCCCCAAGGGACGCCGGTCACGCTGGAGTCCATTGCCAAGCGCTACGGTAACCGCACCGT
GCTGGACAATATTCAATTGCGCATCAGCGCGGGTCAGTTTGTCGCCGTGGTCGGCCGCAGTGGCTGCGGTAAAAGCACGC
TGCTGCGTCTGATGGCAGGACTGGAAAAAGCCACCAGCGGCGCCTTGCTGAGCGGGAATGCGCCCCTTGCCAGCGCCAGA
GACGATACCCGCTTAATGTTTCAGGACGCCCGCCTGCTTCCGTGGAAAAAGGTGATCGACAATGTGGGCCTTGGCCTGCG
CGGTAACTGGCGTGCCGATGCGTTGCAAGCACTGGAAGCCGTCGGGCTGGCCGACCGCGCCAACGAGTGGCCGGCGGCCT
TGTCCGGAGGACAAAAACAGCGAGTGGCTCTGGCACGTGCGCTGATCCACCGTCCACGCCTGTTGCTGTTGGACGAACCT
TTGGGGGCGCTCGACGCCTTGACGCGGATTGAAATGCAGGGATTGATTGAAGGGTTGTGGCAACAGCACGGTTTCACCGT
ATTGCTGGTGACGCATGACGTCAGTGAAGCCATTGCGTTGGCGGATCGCGTCATTTTGATTGAGGAAGGCCGTATCGGCC
TGGATCTGACCGTCGACCTGCCGCGACCACGGCGCAAAGGGTCGGTCAAACTGGCAGAGCTGGAAGCCGAAGTGCTGGAC
AGAGTATTGTCTCCGCCCTCCCCCTTAAGCCAGGCCACACGCCGCGCAGCAAATTAA

Protein sequence :
MTTPARIPQGTPVTLESIAKRYGNRTVLDNIQLRISAGQFVAVVGRSGCGKSTLLRLMAGLEKATSGALLSGNAPLASAR
DDTRLMFQDARLLPWKKVIDNVGLGLRGNWRADALQALEAVGLADRANEWPAALSGGQKQRVALARALIHRPRLLLLDEP
LGALDALTRIEMQGLIEGLWQQHGFTVLLVTHDVSEAIALADRVILIEEGRIGLDLTVDLPRPRRKGSVKLAELEAEVLD
RVLSPPSPLSQATRRAAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-36 50