Gene Information

Name : M495_07180 (M495_07180)
Accession : YP_008229391.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1517856 - 1518314 bp
Length : 459 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGATCGCGTTAATATCATTCACGATTTGCTGGACTGGATTGAAACCCATCTGGATCAGCCGTTACTGTTAGACAACGT
AGCGGCGAAGTCAGGCTACTCCAAGTGGCACCTGCAAAGGATGTTCCGCAGCACTACCGGGCATGCTTTAGGCAGTTACA
TTCGCGAGCGTCGACTGTCGCAAGCCGCGCAAGCACTGCGTTCGACCCCGCGCCCTATTCTCGACATTGCCCTGCAGTTC
CACTTTGATTCTCAGCCGTCTTTTTCACGCGCATTTAAAAAACAGTTCGGCAAAACGCCGGCGGTTTATCGTCGCACAAC
CCGCTGGGACGTCGCAGAGATGCACCCGCAGCCGATAGAACCGCTGAAAGGGCATCGCCATGAGTCCCCTGGCGTGCATC
TGTGGTATGCCGGTAAATGCCTGGACAGTGTCTGTACCAACTGGGTTGGTCAACACTGA

Protein sequence : 
MDRVNIIHDLLDWIETHLDQPLLLDNVAAKSGYSKWHLQRMFRSTTGHALGSYIRERRLSQAAQALRSTPRPILDIALQF
HFDSQPSFSRAFKKQFGKTPAVYRRTTRWDVAEMHPQPIEPLKGHRHESPGVHLWYAGKCLDSVCTNWVGQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 1e-29 54
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 1e-29 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_07180 YP_008229391.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 5e-30 54
M495_07180 YP_008229391.1 AraC family transcriptional regulator CP001138.1.gene1637. Protein 9e-26 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_07180 YP_008229391.1 AraC family transcriptional regulator VFG1038 Protein 5e-30 54